RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 C11orf84Q9BUA3 381 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 RRN3Q9NYV6 651 aa14.27□□□□□ -0.12
MCF2L-209ENST00000397036 PACSIN2Q9UNF0 486 aaPredicted RBP14.27□□□□□ -0.12
MCF2L-209ENST00000397036 FAM92AA1XBS5 289 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 TMEM110-MUSTN1A8MSY1 372 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 C5orf67F2Z3F1 127 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 RNF8O76064 485 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 URODP06132 367 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 RB1P06400 928 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 CTSAP10619 480 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 HAPLN1P10915 354 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-209ENST00000397036 CPB1P15086 417 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 FLT3P36888 993 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 GRIK1P39086 918 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 MATKP42679 507 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 PAFAH1B1P43034 410 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 TUFMP49411 452 aaKnown RBP14.26□□□□□ -0.13
MCF2L-209ENST00000397036 RWDD2BP57060 319 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 UBE3AQ05086 875 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 VPS52Q8N1B4 723 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 ZNF461Q8TAF7 563 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 ALG3Q92685 438 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 PIWIL1Q96J94 861 aaKnown RBP14.26□□□□□ -0.13
MCF2L-209ENST00000397036 ULBP1Q9BZM6 244 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 FBXO44Q9H4M3 255 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 ABI2Q9NYB9 513 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-209ENST00000397036 IRAK3Q9Y616 596 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 CDY1Q9Y6F8 540 aa14.26□□□□□ -0.13
MCF2L-209ENST00000397036 SRGAP2O75044 1071 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 LRCH4O75427 683 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 DAB1O75553 588 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ENDOD1O94919 500 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 VNN2O95498 520 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 C1RP00736 705 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 SDC4P31431 198 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 OR1D2P34982 312 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 NOS2P35228 1153 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 NDUFV1P49821 464 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 RPL10AP62906 217 aaKnown RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ROR1Q01973 937 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 TAF5Q15542 800 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 HADHQ16836 314 aaKnown RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 CCDC14Q49A88 953 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 TRNP1Q6NT89 227 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 PRSS55Q6UWB4 352 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 RNF19BQ6ZMZ0 732 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 STRADAQ7RTN6 431 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 BNIPLQ7Z465 357 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 KATNAL2Q8IYT4 538 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 NUP93Q8N1F7 819 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ARFGAP1Q8N6T3 406 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 EMC1Q8N766 993 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ATAD1Q8NBU5 361 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 MYRIPQ8NFW9 859 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 KRT35Q92764 455 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 SAMD11Q96NU1 681 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 NAP1L3Q99457 506 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ZBP1Q9H171 429 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 POPDC2Q9HBU9 364 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 SCML2Q9UQR0 700 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 WDR27A2RRH5 827 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 CCDC85CA6NKD9 419 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 PIK3R2O00459 728 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ZNF185O15231 689 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 KRT7P08729 469 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 ATF2P15336 505 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 CXCR5P32302 372 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 SLC5A3P53794 718 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 RNASE9P60153 205 aaKnown RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 SLC25A52Q3SY17 297 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 BHLHA9Q7RTU4 235 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 GPRIN1Q7Z2K8 1008 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 KLHL23Q8NBE8 558 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 CLEC4CQ8WTT0 213 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 PGAP3Q96FM1 320 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 TBCBQ99426 244 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 CARD6Q9BX69 1037 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 RHOBTB2Q9BYZ6 727 aa14.25□□□□□ -0.13
MCF2L-209ENST00000397036 DDX56Q9NY93 547 aaKnown RBP14.25□□□□□ -0.13
MCF2L-209ENST00000397036 CTAGE15A4D2H0 777 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 ADAM12O43184 909 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 LTFP02788 710 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 CTAGE8P0CG41 777 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 MAGEA10P43363 369 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-209ENST00000397036 TAS2R40P59535 323 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 COPS2P61201 443 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 DCAF12L1Q5VU92 463 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 CTAGE6Q86UF2 777 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 MON1AQ86VX9 555 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 CPNE8Q86YQ8 564 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 CTAGE4Q8IX94 777 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 RCOR2Q8IZ40 523 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 ARHGAP18Q8N392 663 aa14.24□□□□□ -0.13
MCF2L-209ENST00000397036 CMASQ8NFW8 434 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-209ENST00000397036 EXD1Q8NHP7 514 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms