RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SCUBE3Q8IX30 993 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 ADGRF2Q8IZF7 708 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-202ENST00000396629 OTUB2Q96DC9 234 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 EHD2Q9NZN4 543 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 CFAP97Q9P2B7 532 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 HELZ2Q9BYK8 2649 aaKnown RBP9.01□□□□□ -0.97
SCFD1-202ENST00000396629 A0A087WV48 116 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 E2F8A0AVK6 867 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TBC1D3BA6NDS4 549 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 SCAMP3O14828 347 aaKnown RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 HOXC11O43248 304 aaPredicted RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 ZNF883P0CG24 379 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 NDUFV2P19404 249 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 BDNFP23560 247 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 GRIK1P39086 918 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TFAMQ00059 246 aaKnown RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 C19orf57Q0VDD7 668 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 GRIK2Q13002 908 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 POSTNQ15063 836 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 SOWAHAQ2M3V2 549 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 SYCP2LQ5T4T6 812 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 DPH6Q7L8W6 267 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 MIB1Q86YT6 1006 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 BRSK2Q8IWQ3 736 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 CACTINQ8WUQ7 758 aaKnown RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 MYLPFQ96A32 169 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 UBL7Q96S82 380 aaPredicted RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 DUSP9Q99956 384 aaKnown RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 SYT15Q9BQS2 421 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 IKZF4Q9H2S9 585 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 CRTAC1Q9NQ79 661 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 BLOC1S4Q9NUP1 217 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 SMPD4Q9NXE4 827 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TOR4AQ9NXH8 423 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 ITGA11Q9UKX5 1188 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 CDH9Q9ULB4 789 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 CYP8B1Q9UNU6 501 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 SNX9Q9Y5X1 595 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 MYH10P35580 1976 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TK2O00142 265 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TRIM66O15016 1216 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TULP3O75386 442 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 GNSP15586 552 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 PLCG1P19174 1290 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 ANXA13P27216 316 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 WDR45BQ5MNZ6 344 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 DBX2Q6ZNG2 339 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 RGL4Q8IZJ4 473 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 CSGALNACT2Q8N6G5 542 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 NAT16Q8N8M0 369 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 TERB1Q8NA31 727 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
SCFD1-202ENST00000396629 KBTBD7Q8WVZ9 684 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 DNASE2BQ8WZ79 361 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 POMGNT1Q8WZA1 660 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 FOXJ1Q92949 421 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 HVCN1Q96D96 273 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 C8orf48Q96LL4 319 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 DEC1Q9P2X7 70 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 SIX4Q9UIU6 781 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 LIMCH1Q9UPQ0 1083 aa9□□□□□ -0.97
SCFD1-202ENST00000396629 VWA3AA6NCI4 1184 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 ZBTB24O43167 697 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 NDUFS2O75306 463 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 PPP1R37O75864 691 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 MBL2P11226 248 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 LMO2P25791 158 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 WASP42768 502 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 RBP5P82980 135 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 CYP4F3Q08477 520 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 DHX8Q14562 1220 aaKnown RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 MCM6Q14566 821 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 MAPRE1Q15691 268 aaKnown RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 C10orf76Q5T2E6 689 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 BTBD8Q5XKL5 378 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 ARL6IP4Q66PJ3 421 aaKnown RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 NUDT18Q6ZVK8 323 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 ZNF720Q7Z2F6 126 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 FAM184AQ8NB25 1140 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 ZSWIM2Q8NEG5 633 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 CRELD1Q96HD1 420 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 GABRG3Q99928 467 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 STRA6Q9BX79 667 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 NFE2L3Q9Y4A8 694 aa8.99□□□□□ -0.97
SCFD1-202ENST00000396629 FLNBO75369 2602 aaKnown RBP8.99□□□□□ -0.97
SCFD1-202ENST00000396629 A0A1B0GTW7 788 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TRABD2BA6NFA1 517 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 C1QL1O75973 258 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 KRT18P05783 430 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 WARSP23381 471 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 MAOBP27338 520 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 PSMC1P62191 440 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TAF10Q12962 218 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TDRD10Q5VZ19 366 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 EGFLAMQ63HQ2 1017 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 MYCBPAPQ8TBZ2 947 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms