RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZNF840PA6NDX5 716 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 E9PMD0 336 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 SCAMP3O14828 347 aaKnown RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 TRIM66O15016 1216 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 TRIM24O15164 1050 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 OGTO15294 1046 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 BCAT2O15382 392 aaPredicted RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 PCDHGA12O60330 932 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 OAS1P00973 400 aaKnown RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 PIGRP01833 764 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 GUCY2CP25092 1073 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 MCM7P33993 719 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 CCT6AP40227 531 aaKnown RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 WASP42768 502 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 USP46P62068 366 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 INTS6LQ5JSJ4 861 aaKnown RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 SPACA3Q8IXA5 215 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 SPRYD3Q8NCJ5 442 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 TOE1Q96GM8 510 aaKnown RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 DUSP9Q99956 384 aaKnown RBP14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 TTLL2Q9BWV7 592 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 C2CD2Q9Y426 696 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 PCDHGA1Q9Y5H4 931 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 CPQQ9Y646 472 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 SLCO1B1Q9Y6L6 691 aa14.66□□□□□ -0.06
VCPKMT-201ENST00000395859 NOTCH2Q04721 2471 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 A0A0B4J269 797 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 KPNA7A9QM74 516 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 KCNJ18B7U540 433 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 PAPSS1O43252 624 aaPredicted RBP14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 OR52Z1P0C646 297 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 NCAM1P13591 858 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 C6P13671 934 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 PLS3P13797 630 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 GRK6P43250 576 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 MAGEA11P43364 429 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 CLDN6P56747 220 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 CXADRP78310 365 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 RHDQ02161 417 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 GAD2Q05329 585 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 TMEM132DQ14C87 1099 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 SUZ12Q15022 739 aaKnown RBP14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 C10orf76Q5T2E6 689 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 C6orf118Q5T5N4 469 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 SLC39A4Q6P5W5 647 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 ERICH1Q86X53 443 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 DIS3L2Q8IYB7 885 aaKnown RBP14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 PDCL2Q8N4E4 241 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 C4orf32Q8N8J7 132 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 BAP1Q92560 729 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 TTC9Q92623 222 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 FGF11Q92914 225 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 ZFRQ96KR1 1074 aaKnown RBP14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 SPATA17Q96L03 361 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 TIPINQ9BVW5 301 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 BRMS1Q9HCU9 246 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 ORC3Q9UBD5 711 aaPredicted RBP14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 GTF3C4Q9UKN8 822 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 MYH11P35749 1972 aa14.65□□□□□ -0.06
VCPKMT-201ENST00000395859 A0A1B0GVT2 93 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 METTL12A8MUP2 240 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 PFKFB2O60825 505 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 CDC45O75419 566 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 IL12RB1P42701 662 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 CSRP3P50461 194 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 NCKAP1LP55160 1127 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 KIF19Q2TAC6 998 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 DCAF12L1Q5VU92 463 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 FAM171BQ6P995 826 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 KCNK18Q7Z418 384 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 NAT16Q8N8M0 369 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 CEP295NLQ96MC4 621 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 ASB7Q9H672 318 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 ITM2CQ9NQX7 267 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 DPP3Q9NY33 737 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 CFAP97Q9P2B7 532 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 TBC1D14Q9P2M4 693 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 DEC1Q9P2X7 70 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 L1RE1Q9UN81 338 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 AHCTF1Q8WYP5 2266 aa14.64□□□□□ -0.07
VCPKMT-201ENST00000395859 MEI4A8MW99 385 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 IGLV3-19P01714 112 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 ACAT1P24752 427 aaKnown RBP14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 ORC2Q13416 577 aaPredicted RBP14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 TAF1BQ53T94 588 aaPredicted RBP14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 OSTM1Q86WC4 334 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 IGSF22Q8N9C0 903 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 SNRNP27Q8WVK2 155 aaKnown RBP14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 OTUB2Q96DC9 234 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 TMEM176AQ96HP8 235 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 GPR174Q9BXC1 333 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 TM6SF1Q9BZW5 370 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 SMPD4Q9NXE4 827 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 KCNG1Q9UIX4 513 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 RAD54BQ9Y620 910 aa14.63□□□□□ -0.07
VCPKMT-201ENST00000395859 ANKRD17O75179 2603 aaKnown RBP14.62□□□□□ -0.07
VCPKMT-201ENST00000395859 TLN1Q9Y490 2541 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms