RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CDH19Q9H159 772 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 ZC3H7BQ9UGR2 993 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 GNPTGQ9UJJ9 305 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 CEPT1Q9Y6K0 416 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 ITM2AO43736 263 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 NUDT17P0C025 328 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 RARBP10826 455 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 ATN1P54259 1190 aaPredicted RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 THOC5Q13769 683 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 MAPRE2Q15555 327 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 CLUL1Q15846 466 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 MEA1Q16626 185 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 EARS2Q5JPH6 523 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 NANOGP8Q6NSW7 305 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 C15orf52Q6ZUT6 534 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 PCGF5Q86SE9 256 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 SRBD1Q8N5C6 995 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 MTMR14Q8NCE2 650 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 TGFBRAP1Q8WUH2 860 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 MCUR1Q96AQ8 359 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 INTS12Q96CB8 462 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 WNT8AQ9H1J5 351 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 NEUROG2Q9H2A3 272 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 FOXP1Q9H334 677 aaPredicted RBP9.25□□□□□ -0.93
MSH5-205ENST00000395853 AZI2Q9H6S1 392 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 RIC8AQ9NPQ8 531 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 OLFML3Q9NRN5 406 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 LRWD1Q9UFC0 647 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 KCNH3Q9ULD8 1083 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 PTPN22Q9Y2R2 807 aa9.25□□□□□ -0.93
MSH5-205ENST00000395853 TRAV6A0A075B6T7 132 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 ILVBLA1L0T0 632 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 KLRF2D3W0D1 207 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 POLR1CO15160 346 aaPredicted RBP9.24□□□□□ -0.93
MSH5-205ENST00000395853 EXOC3O60645 756 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 KRT5P13647 590 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 HOXB1P14653 301 aaPredicted RBP9.24□□□□□ -0.93
MSH5-205ENST00000395853 ATP6V1B1P15313 513 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 CDK9P50750 372 aaKnown RBP9.24□□□□□ -0.93
MSH5-205ENST00000395853 PEX3P56589 373 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 CYP27A1Q02318 531 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 BTKQ06187 659 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 KCTD20Q7Z5Y7 419 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 KLHL7Q8IXQ5 586 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 GALNT4Q8N4A0 578 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 MGARPQ8TDB4 240 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 SLC10A4Q96EP9 437 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 IFT22Q9H7X7 185 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 NHEJ1Q9H9Q4 299 aaPredicted RBP9.24□□□□□ -0.93
MSH5-205ENST00000395853 S100A14Q9HCY8 104 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 CABP5Q9NP86 173 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 IL17RBQ9NRM6 502 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 STARD13Q9Y3M8 1113 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 SMCO2A6NFE2 343 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 C19orf81C9J6K1 198 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 KATNA1O75449 491 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 GMNNO75496 209 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 GZMAP12544 262 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 ATF6P18850 670 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 ALAS2P22557 587 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 NR4A1P22736 598 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 JAK1P23458 1154 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 MLLT3P42568 568 aaPredicted RBP9.24□□□□□ -0.93
MSH5-205ENST00000395853 CASP5P51878 434 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 NR1H2P55055 460 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 ATP6V0D1P61421 351 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 TMPRSS15P98073 1019 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 KRT31Q15323 416 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 TRIM16LQ309B1 348 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 METTL11BQ5VVY1 283 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 CGB2Q6NT52 195 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 GATAD2AQ86YP4 633 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 MAPKAPK5Q8IW41 473 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 SLC44A5Q8NCS7 719 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 CKAP2Q8WWK9 683 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 PAGE5Q96GU1 130 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 CEP19Q96LK0 163 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 TGS1Q96RS0 853 aaKnown RBP9.24□□□□□ -0.93
MSH5-205ENST00000395853 PSD2Q9BQI7 771 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 BTBD10Q9BSF8 475 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 R3HDMLQ9H3Y0 253 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 MLXIPQ9HAP2 919 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 FANCFQ9NPI8 374 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 USP40Q9NVE5 1235 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
MSH5-205ENST00000395853 A8MU76 341 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 RHOBTB3O94955 611 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 IL1R1P14778 569 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 TSPAN7P41732 249 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 STX17P56962 302 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 XIAPP98170 497 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 C19orf57Q0VDD7 668 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 DLG1Q12959 904 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 PRAMEF18Q5VWM3 479 aa9.23□□□□□ -0.93
MSH5-205ENST00000395853 AAGABQ6PD74 315 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms