RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MBLAC1A4D2B0 266 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-204ENST00000395756 UNCXA6NJT0 531 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 RASAL3Q86YV0 1011 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 CMASQ8NFW8 434 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-204ENST00000395756 P3H4Q92791 437 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 TRIP11Q15643 1979 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 CTGFP29279 349 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 BBS9Q3SYG4 887 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 SWT1Q5T5J6 900 aaKnown RBP18.7■□□□□ 0.58
SREBF1-204ENST00000395756 BBS12Q6ZW61 710 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 APBB1IPQ7Z5R6 666 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-204ENST00000395756 SLC35F5Q8WV83 523 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 SLC24A3Q9HC58 644 aa18.7■□□□□ 0.58
SREBF1-204ENST00000395756 DDX20Q9UHI6 824 aaKnown RBP18.7■□□□□ 0.58
SREBF1-204ENST00000395756 MCF2LO15068 1137 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 SPAG7O75391 227 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 ITGAVP06756 1048 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 BRAFP15056 766 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 SSTR1P30872 391 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 MSS51Q4VC12 460 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 PAN2Q504Q3 1202 aaKnown RBP18.69■□□□□ 0.58
SREBF1-204ENST00000395756 OLFML1Q6UWY5 402 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 TAOK1Q7L7X3 1001 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 APPL2Q8NEU8 664 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 NKD2Q969F2 451 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-204ENST00000395756 CNOT10Q9H9A5 744 aaKnown RBP18.69■□□□□ 0.58
SREBF1-204ENST00000395756 DRG1Q9Y295 367 aaKnown RBP18.69■□□□□ 0.58
SREBF1-204ENST00000395756 SLC6A3Q01959 620 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 FNBP1LQ5T0N5 605 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 UBXN11Q5T124 520 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 ERMARDQ5T6L9 678 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 RNASEH2BQ5TBB1 312 aaKnown RBP18.69■□□□□ 0.58
SREBF1-204ENST00000395756 NT5DC4Q86YG4 428 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 KBTBD7Q8WVZ9 684 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 KIF9Q9HAQ2 790 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 ANK1P16157 1881 aa18.69■□□□□ 0.58
SREBF1-204ENST00000395756 HGSO14964 777 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 PPP1R12AO14974 1030 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CRHR2Q13324 411 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 SUGP1Q8IWZ8 645 aaKnown RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CCDC77Q9BR77 488 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 OSBPL7Q9BZF2 842 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 DHX35Q9H5Z1 703 aaKnown RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 HUS1O60921 280 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 AVILO75366 819 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 KIAA0754O94854 1291 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 RGS2P41220 211 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 TRIM32Q13049 653 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 MPP2Q14168 576 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 DPYSL3Q14195 570 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 ALKAL1Q6UXT8 129 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 LRRC34Q8IZ02 419 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 SMG8Q8ND04 991 aaKnown RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CPT1BQ92523 772 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 KHSRPQ92945 711 aaKnown RBP eCLIP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CHMP6Q96FZ7 201 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CABS1Q96KC9 395 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 ROPN1BQ9BZX4 212 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 STMN4Q9H169 189 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 ROPN1Q9HAT0 212 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CNTN3Q9P232 1028 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 KIAA1257Q9ULG3 409 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 CYP4V2Q6ZWL3 525 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-204ENST00000395756 SERPINB12Q96P63 405 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 PCDH9Q9HC56 1237 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 TMPRSS4Q9NRS4 437 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 GGT7Q9UJ14 662 aa18.68■□□□□ 0.58
SREBF1-204ENST00000395756 TRIP12Q14669 1992 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 RASA4BC9J798 803 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 RASA4O43374 803 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 PURAQ00577 322 aaKnown RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 EFTUD2Q15029 972 aaKnown RBP eCLIP18.67■□□□□ 0.583e-7■■■■□ 21.6
SREBF1-204ENST00000395756 HIF1AQ16665 826 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 DRICH1Q6PGQ1 229 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 CTU1Q7Z7A3 348 aaKnown RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 FAM228AQ86W67 206 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 IFNL1Q8IU54 200 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 OTUD6BQ8N6M0 293 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 WNT8BQ93098 351 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 GAD1Q99259 594 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 ELAC2Q9BQ52 826 aaKnown RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 SNRNP25Q9BV90 132 aaKnown RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 RSAD1Q9HA92 442 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 XPO7Q9UIA9 1087 aaKnown RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 APOC4-APOC2K7ER74 178 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 KCNN4O15554 427 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 BEST1O76090 585 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 APOC2P02655 101 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 KRT15P19012 456 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 TKTP29401 623 aaKnown RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 MLH1P40692 756 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 NDUFV1P49821 464 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 TAF6P49848 677 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 LILRA4P59901 499 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 ADAM17P78536 824 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 ZKSCAN8Q15776 578 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-204ENST00000395756 WSCD1Q658N2 575 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 C17orf99Q6UX52 265 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 CENPUQ71F23 418 aa18.67■□□□□ 0.58
SREBF1-204ENST00000395756 ADGRF2Q8IZF7 708 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms