RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ARNTL2Q8WYA1 636 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 C18orf8Q96DM3 657 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 SAMD11Q96NU1 681 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 MCEEQ96PE7 176 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 ERP44Q9BS26 406 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 C11orf84Q9BUA3 381 aaPredicted RBP15.87■□□□□ 0.13
SCAF11-204ENST00000395454 VN1R3Q9BXE9 311 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
SCAF11-204ENST00000395454 PLXNA4Q9HCM2 1894 aa15.87■□□□□ 0.13
SCAF11-204ENST00000395454 ARHGEF37A1IGU5 675 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 C5orf67F2Z3F1 127 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 GJB6O95452 261 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 SETSIPP0DME0 302 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 HSPA9P38646 679 aaKnown RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM193AP78312 1265 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 KIAA1841Q6NSI8 718 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 DDX53Q86TM3 631 aaKnown RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 JAMLQ86YT9 394 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 VPS52Q8N1B4 723 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 TTPALQ9BTX7 342 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 PCDHB8Q9UN66 801 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 NME7Q9Y5B8 376 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 REV3LO60673 3130 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 AGPSO00116 658 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 SYN3O14994 580 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 SOD2P04179 222 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 ERBB2P04626 1255 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 RB1P06400 928 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM163BP0C2L3 166 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM153BP0C7A2 387 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 GBP1P32455 592 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 COILP38432 576 aaPredicted RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 YWHAHQ04917 246 aaPredicted RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 ORC1Q13415 861 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 USP41Q3LFD5 358 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM153CQ494X1 144 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 RTP2Q5QGT7 225 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 ALS2CLQ60I27 953 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 ARHGAP17Q68EM7 881 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 DPH6Q7L8W6 267 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 METTL23Q86XA0 190 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FBXO22Q8NEZ5 403 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 OR6B3Q8NGW1 331 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM71BQ8TC56 605 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 IFT81Q8WYA0 676 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 MAGOHBQ96A72 148 aaKnown RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 HEXIM2Q96MH2 286 aaKnown RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM129AQ9BZQ8 928 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 MIS12Q9H081 205 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 ST7Q9NRC1 585 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 FAM153AQ9UHL3 310 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 DSEQ9UL01 958 aa15.86■□□□□ 0.13
SCAF11-204ENST00000395454 M0QYV0 167 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 C2CD2LO14523 706 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 COPS2P61201 443 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 ACAP1Q15027 740 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 CYP4A22Q5TCH4 519 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 OVOS1Q6IE37 1185 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 DCUN1D2Q6PH85 259 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 CCDC137Q6PK04 289 aaKnown RBP15.85■□□□□ 0.13
SCAF11-204ENST00000395454 ADAT2Q7Z6V5 191 aaKnown RBP15.85■□□□□ 0.13
SCAF11-204ENST00000395454 RNF168Q8IYW5 571 aaPredicted RBP15.85■□□□□ 0.13
SCAF11-204ENST00000395454 IQCKQ8N0W5 287 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 TMEM86AQ8N2M4 240 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 TSEN2Q8NCE0 465 aaKnown RBP15.85■□□□□ 0.13
SCAF11-204ENST00000395454 STK32AQ8WU08 396 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 KBTBD7Q8WVZ9 684 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 GDAP1L1Q96MZ0 367 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 SH3GL2Q99962 352 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 HERPUD2Q9BSE4 406 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 HOMER3Q9NSC5 361 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 RASAL2Q9UJF2 1139 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 TSPAN16Q9UKR8 245 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 XIRP2A4UGR9 3374 aa15.85■□□□□ 0.13
SCAF11-204ENST00000395454 DAPK3O43293 454 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 SYF2O95926 243 aaKnown RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 EFEMP2O95967 443 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 KRT3P12035 628 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 TYMPP19971 482 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 FGFR3P22607 806 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 CA8P35219 290 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 RFC1P35251 1148 aaPredicted RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 PSMC1P62191 440 aaKnown RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 VARS2Q5ST30 1063 aaKnown RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 DAB2IPQ5VWQ8 1189 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 RCOR2Q8IZ40 523 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 CRYBG2Q8N1P7 616 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 POF1BQ8WVV4 589 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 RBM41Q96IZ5 413 aaKnown RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 NEUROG2Q9H2A3 272 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 SNX25Q9H3E2 840 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 ZDHHC18Q9NUE0 388 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 DDX43Q9NXZ2 648 aaKnown RBP15.84■□□□□ 0.13
SCAF11-204ENST00000395454 TJP2Q9UDY2 1190 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 STK39Q9UEW8 545 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 TSC2P49815 1807 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 MYO7AQ13402 2215 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 GOLGA6BA6NDN3 693 aa15.84■□□□□ 0.13
SCAF11-204ENST00000395454 A8MXQ7 604 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms