RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ARRDC1-AS1Q9H2J1 176 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 RCOR1Q9UKL0 485 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SNX9Q9Y5X1 595 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 CHD5Q8TDI0 1954 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 PENKP01210 267 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ADH5P11766 374 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 YWHAQP27348 245 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 GNL1P36915 607 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 KCNB1Q14721 858 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ARID5BQ14865 1188 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SGSM1Q2NKQ1 1148 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 IL31Q6EBC2 164 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 CADM4Q8NFZ8 388 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 BAHD1Q8TBE0 780 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 PARD3BQ8TEW8 1205 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 AZIN2Q96A70 460 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TMEM51Q9NW97 253 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 USP36Q9P275 1121 aaKnown RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TFIP11Q9UBB9 837 aaKnown RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 MBD1Q9UIS9 605 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 GTF3C4Q9UKN8 822 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZDBF2Q9HCK1 2354 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 C2orf78A6NCI8 922 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 K7ELQ4 463 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 CDX4O14627 284 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 KIF20AO95235 890 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 CAVIN2O95810 425 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ASS1P00966 412 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 CISD3P0C7P0 127 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 HDCP19113 662 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ARHGAP17Q68EM7 881 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 RHBDF2Q6PJF5 856 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SHC4Q6S5L8 630 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 BEND5Q7L4P6 421 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 FAM35AQ86V20 835 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SYCP3Q8IZU3 236 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 IL17RCQ8NAC3 791 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 KDM1BQ8NB78 822 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZFYVE19Q96K21 471 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SLC22A12Q96S37 553 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 PLIN2Q99541 437 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SNX25Q9H3E2 840 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 TMEM9BQ9NQ34 198 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 PLXNA2O75051 1894 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 COL27A1Q8IZC6 1860 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SERPINF2P08697 491 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 USP46P62068 366 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 TNNC1P63316 161 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 DDR2Q16832 855 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 DUOXA1Q1HG43 343 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 HECTD3Q5T447 861 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 PRR23BQ6ZRT6 265 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 CBWD2Q8IUF1 395 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ARHGAP18Q8N392 663 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZNF557Q8N988 423 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZSWIM2Q8NEG5 633 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 TSTD1Q8NFU3 115 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 DNASE2BQ8WZ79 361 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SAAL1Q96ER3 474 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZNF419Q96HQ0 510 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 MRPL45Q9BRJ2 306 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 FBRSL1Q9HCM7 1045 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 FAM13BQ9NYF5 915 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 PLXNB3Q9ULL4 1909 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 KHNYNO15037 678 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ACTN4O43707 911 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 VNN1O95497 513 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SLFN14P0C7P3 912 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 LMO2P25791 158 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 EIF4HQ15056 248 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 LPCAT2Q7L5N7 544 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 HS2ST1Q7LGA3 356 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 ARL14EPQ8N8R7 260 aaPredicted RBP6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 DCLK3Q9C098 648 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 SPHK2Q9NRA0 654 aa6.61□□□□□ -1.35
SMARCAD1-203ENST00000394961 RIOK3O14730 519 aaKnown RBP6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 TIMM44O43615 452 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 ADAM23O75077 832 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 KAT7O95251 611 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 CCDC192P0DO97 292 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 TRIM21P19474 475 aaKnown RBP6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 ACO1P21399 889 aaKnown RBP6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 OXTRP30559 389 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 RPL34P49207 117 aaKnown RBP6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 EDRF1Q3B7T1 1238 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 CYP2U1Q7Z449 544 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 RAB44Q7Z6P3 723 aaPredicted RBP6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 FAM131CQ96AQ9 280 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 EDEM2Q9BV94 578 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 RNF38Q9H0F5 515 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 SUSD2Q9UGT4 822 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 HCN2Q9UL51 889 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 ADAMTS9Q9P2N4 1935 aa6.6□□□□□ -1.35
SMARCAD1-203ENST00000394961 A0A1W2PQD8 194 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms