RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CPXM1Q96SM3 734 aa19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 FBXO6Q9NRD1 293 aaPredicted RBP19.15■□□□□ 0.66
PCDHA1-202ENST00000394633 TRPM7Q96QT4 1865 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 TCRBV9S1A1TA0A576 114 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 KBTBD13C9JR72 458 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 OGTO15294 1046 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 RBP3P10745 1247 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 BGNP21810 368 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 RAP1GAPP47736 663 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 TFAMQ00059 246 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 KBTBD12Q3ZCT8 623 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 XYLT1Q86Y38 959 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 CMASQ8NFW8 434 aaPredicted RBP19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 HSPH1Q92598 858 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 TTC17Q96AE7 1141 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 MRPL4Q9BYD3 311 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 LHX5Q9H2C1 402 aa19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 CPSF3Q9UKF6 684 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-202ENST00000394633 TGDSO95455 350 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 DLDP09622 509 aaKnown RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 HOXC6P09630 235 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 LINGO3P0C6S8 592 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 ICAM3P32942 547 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 PCK1P35558 622 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 CCNHP51946 323 aaPredicted RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 ZNF200P98182 395 aaPredicted RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 RINLQ6ZS11 566 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 PRPF31Q8WWY3 499 aaKnown RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 ACO2Q99798 780 aaKnown RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 TUBB6Q9BUF5 446 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 CNTN3Q9P232 1028 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 MTO1Q9Y2Z2 717 aaKnown RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 TEX264Q9Y6I9 313 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 CCL15-CCL14A0A0B4J2E2 113 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 C2orf71A6NGG8 1288 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 BTBD19C9JJ37 291 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 ABLIM1O14639 778 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 MCF2LO15068 1137 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 ERBB2P04626 1255 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 PYGBP11216 843 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 MIPP30301 263 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 GRIK3Q13003 919 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 STXBP2Q15833 593 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 CCL15Q16663 113 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 FAM182AQ5T1J6 154 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 NPNTQ6UXI9 565 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 APBB1IPQ7Z5R6 666 aaPredicted RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 SPATA18Q8TC71 538 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 DNAJC9Q8WXX5 260 aa19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 NXF1Q9UBU9 619 aaKnown RBP19.13■□□□□ 0.65
PCDHA1-202ENST00000394633 ACADSP16219 412 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 GCKP35557 465 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 SYCP2LQ5T4T6 812 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 CHST13Q8NET6 341 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 CALN1Q9BXU9 219 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 UNCXA6NJT0 531 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 TRUB2O95900 331 aaKnown RBP19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 INHBAP08476 426 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 HUNKP57058 714 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 ZBTB16Q05516 673 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 MMRN1Q13201 1228 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 ORC1Q13415 861 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 KCNJ11Q14654 390 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 ACSBG2Q5FVE4 666 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 TTC7BQ86TV6 843 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 ZNF333Q96JL9 665 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 IKBKGQ9Y6K9 419 aa19.12■□□□□ 0.65
PCDHA1-202ENST00000394633 PDHXO00330 501 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 GYG2O15488 501 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 MAFO75444 373 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 PDHA1P08559 390 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 NEFHP12036 1026 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 EFNA5P52803 228 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 YWHAGP61981 247 aaKnown RBP eCLIP19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 KPNB1Q14974 876 aaKnown RBP19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 KRT72Q14CN4 511 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 SURF1Q15526 300 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 TSNAXIP1Q2TAA8 658 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 PRPF39Q86UA1 669 aaKnown RBP19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 LMNTD2Q8IXW0 634 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 PEBP4Q96S96 227 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 NRBP2Q9NSY0 501 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 NMRK1Q9NWW6 199 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 STOML1Q9UBI4 398 aa19.11■□□□□ 0.65
PCDHA1-202ENST00000394633 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 E5RJQ4 531 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 MED7O43513 233 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 AVILO75366 819 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 FAM155BO75949 473 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 KRT36O76013 467 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 IL1BP01584 269 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 C1QAP02745 245 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 PRKCBP05771 671 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 OSBPP22059 807 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 SERPINB4P48594 390 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 CDH8P55286 799 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 SESN3P58005 492 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 ROR1Q01973 937 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 NOMO1Q15155 1222 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms