RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SCUBE3Q8IX30 993 aa20.43■□□□□ 0.86
RCCD1-201ENST00000394258 NFKBIZQ9BYH8 718 aa20.43■□□□□ 0.86
RCCD1-201ENST00000394258 ALG13Q9NP73 1137 aaKnown RBP20.43■□□□□ 0.86
RCCD1-201ENST00000394258 HES2Q9Y543 173 aa20.43■□□□□ 0.86
RCCD1-201ENST00000394258 TYROBPO43914 113 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 TSPAN1O60635 241 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 ATICP31939 592 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 GABRB2P47870 512 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 CCNHP51946 323 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-201ENST00000394258 CRYMQ14894 314 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 GOLGA7BQ2TAP0 167 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 ZC3H12AQ5D1E8 599 aaKnown RBP20.42■□□□□ 0.86
RCCD1-201ENST00000394258 ASRGL1Q7L266 308 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 PDIK1LQ8N165 341 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 ATP11CQ8NB49 1132 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 ERP27Q96DN0 273 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 TMEM237Q96Q45 408 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 PAFAH2Q99487 392 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 CYP3A43Q9HB55 503 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 ARHGEF3Q9NR81 526 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 CHKBQ9Y259 395 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 SNX9Q9Y5X1 595 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 TRIP11Q15643 1979 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 H3BRB1 525 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 PRPSAP2O60256 369 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 RBP5P82980 135 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 FAM187BQ17R55 369 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 GLRA4Q5JXX5 417 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 PPP1R26Q5T8A7 1209 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-201ENST00000394258 FAXCQ5TGI0 409 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 HHATQ5VTY9 493 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 PMF1Q6P1K2 205 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 CCDC33Q8N5R6 958 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 MAGEC3Q8TD91 643 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.42■□□□□ 0.86
RCCD1-201ENST00000394258 CNPY3Q9BT09 278 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 NT5C1AQ9BXI3 368 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 TUT1Q9H6E5 874 aaKnown RBP20.42■□□□□ 0.86
RCCD1-201ENST00000394258 RSAD1Q9HA92 442 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 DNAH12Q6ZR08 3092 aa20.42■□□□□ 0.86
RCCD1-201ENST00000394258 C2CD4BA6NLJ0 364 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 HCRTO43612 131 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 PFKMP08237 780 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 ADRA1DP25100 572 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 SLC8A1P32418 973 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 PEX19P40855 299 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 SATB1Q01826 763 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 ROR1Q01973 937 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 KRT81Q14533 505 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 MAMDC4Q6UXC1 1216 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 CYP4V2Q6ZWL3 525 aaPredicted RBP20.41■□□□□ 0.86
RCCD1-201ENST00000394258 GBP7Q8N8V2 638 aaPredicted RBP20.41■□□□□ 0.86
RCCD1-201ENST00000394258 MRPL45Q9BRJ2 306 aaKnown RBP20.41■□□□□ 0.86
RCCD1-201ENST00000394258 B3GNT5Q9BYG0 378 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 MIS12Q9H081 205 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 FAM49AQ9H0Q0 323 aaPredicted RBP20.41■□□□□ 0.86
RCCD1-201ENST00000394258 ETNK1Q9HBU6 452 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 SCN1AP35498 2009 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 MAGEB2O15479 319 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 TARSP26639 723 aaKnown RBP20.41■□□□□ 0.86
RCCD1-201ENST00000394258 PHBP35232 272 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 EFHC2Q5JST6 749 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 C16orf70Q9BSU1 422 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 SLC24A2Q9UI40 661 aa20.41■□□□□ 0.86
RCCD1-201ENST00000394258 ELK3P41970 407 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 PDK4Q16654 411 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 LRRC8CQ8TDW0 803 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 ZNF408Q9H9D4 720 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 STARD13Q9Y3M8 1113 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 PPP6R3Q5H9R7 873 aaPredicted RBP20.4■□□□□ 0.86
RCCD1-201ENST00000394258 LINC01465Q8N7H1 131 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 C7orf31Q8N865 590 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 UTP4Q969X6 686 aaKnown RBP20.4■□□□□ 0.86
RCCD1-201ENST00000394258 SNTG2Q9NY99 539 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 SLC17A7Q9P2U7 560 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 HAO1Q9UJM8 370 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 EDF1O60869 148 aaKnown RBP20.4■□□□□ 0.86
RCCD1-201ENST00000394258 UPP2O95045 317 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 NPTXRO95502 500 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 ANP32DO95626 131 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 MSH2P43246 934 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 ACVR2BQ13705 512 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 CCDC14Q49A88 953 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 LCLAT1Q6UWP7 414 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 GRAMD1AQ96CP6 724 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 ZMAT2Q96NC0 199 aaKnown RBP20.4■□□□□ 0.86
RCCD1-201ENST00000394258 MAGEB5Q9BZ81 275 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 VRTNQ9H8Y1 702 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 ITGA11Q9UKX5 1188 aa20.4■□□□□ 0.86
RCCD1-201ENST00000394258 SMG5Q9UPR3 1016 aaKnown RBP20.4■□□□□ 0.86
RCCD1-201ENST00000394258 TFE3P19532 575 aaPredicted RBP20.39■□□□□ 0.85
RCCD1-201ENST00000394258 PCK1P35558 622 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 OVGP1Q12889 678 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 RIPK1Q13546 671 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 CA9Q16790 459 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 OTOAQ7RTW8 1153 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 VSIG1Q86XK7 387 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 GPRC5AQ8NFJ5 357 aa20.39■□□□□ 0.85
RCCD1-201ENST00000394258 PPTC7Q8NI37 304 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms