RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 COCHO43405 550 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 KAT7O95251 611 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 ABL1P00519 1130 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 C4BPAP04003 597 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 RPN1P04843 607 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 MBL2P11226 248 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 GBP1P32455 592 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 KIR2DL1P43626 348 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 NCOA4Q13772 614 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 ZNF699Q32M78 642 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 ZNF667Q5HYK9 610 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 SPDYCQ5MJ68 293 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 EOGTQ5NDL2 527 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 HECTD3Q5T447 861 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 N4BP2L1Q5TBK1 243 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 ANO7Q6IWH7 933 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 PAQR9Q6ZVX9 377 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 IL17RCQ8NAC3 791 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 MDGA1Q8NFP4 955 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 FBXO32Q969P5 355 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 SMARCD1Q96GM5 515 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 EDEM2Q9BV94 578 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 BLZF1Q9H2G9 400 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 CFAP45Q9UL16 551 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 PCDHA7Q9UN72 937 aa18.56■□□□□ 0.56
SNRPA1-202ENST00000394082 HOXC11O43248 304 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 KCNK5O95279 499 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 ZSCAN22P10073 491 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 ADH5P11766 374 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 P4HA1P13674 534 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 SEC13P55735 322 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 GAD2Q05329 585 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 CUL4BQ13620 913 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 FAM35AQ86V20 835 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 ETFBKMTQ8IXQ9 262 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 CRYBG2Q8N1P7 616 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 PHTF2Q8N3S3 785 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 PLEKHO2Q8TD55 490 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 TAF4BQ92750 862 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 KCNK16Q96T55 309 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 SMOC1Q9H4F8 434 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 SMYD3Q9H7B4 428 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 CSNK1G1Q9HCP0 422 aa18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 POLMQ9NP87 494 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-202ENST00000394082 NUP205Q92621 2012 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 MAP1BP46821 2468 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 LNP1A1A4G5 178 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 LRRIQ3A6PVS8 624 aaPredicted RBP18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 IKBKBO14920 756 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 KHNYNO15037 678 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 MYL1P05976 194 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 CASP1P29466 404 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 P2RY2P41231 377 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 DPP6P42658 865 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 SLC6A11P48066 632 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 ME1P48163 572 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 SLC5A3P53794 718 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 CDH8P55286 799 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 BIRC3Q13489 604 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 BYSLQ13895 437 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 ST3GAL2Q16842 350 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 SGSM1Q2NKQ1 1148 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 ZACNQ401N2 412 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 DAB2IPQ5VWQ8 1189 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 TCEAL6Q6IPX3 200 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 TMEM92Q6UXU6 159 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 NUDT18Q6ZVK8 323 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 UNC93AQ86WB7 457 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 CEP57L1Q8IYX8 460 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 FUKQ8N0W3 1084 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 CCDC33Q8N5R6 958 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 TMC2Q8TDI7 906 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 WHAMMQ8TF30 809 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 TCEAL3Q969E4 200 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 FBXO44Q9H4M3 255 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 ARHGEF4Q9NR80 690 aa18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 EVLQ9UI08 416 aaPredicted RBP18.54■□□□□ 0.56
SNRPA1-202ENST00000394082 PDXKO00764 312 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 KLRC4O43908 158 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 VNN1O95497 513 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 F13A1P00488 732 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 AFMP43652 599 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 CASP4P49662 377 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 LY6G5CQ5SRR4 150 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 TRMT11Q7Z4G4 463 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 C12orf40Q86WS4 652 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 ALLCQ8N6M5 410 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 TXNDC5Q8NBS9 432 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 SCAMP5Q8TAC9 235 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 SPACA7Q96KW9 195 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 TPSD1Q9BZJ3 242 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 KCTD10Q9H3F6 313 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 CHORDC1Q9UHD1 332 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 USP25Q9UHP3 1055 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 SH3BP1Q9Y3L3 701 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 STARD13Q9Y3M8 1113 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 ABCA7Q8IZY2 2146 aa18.53■□□□□ 0.56
SNRPA1-202ENST00000394082 SGK1O00141 431 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms