RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 FASTKD1Q53R41 847 aaKnown RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 CYTH2Q99418 400 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 NAT9Q9BTE0 207 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 TSPAN16Q9UKR8 245 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 PLA2G4CQ9UP65 541 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 DOLKQ9UPQ8 538 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 IGLV3-22A0A075B6J6 115 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 EIF3HO15372 352 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 H2AFYO75367 372 aaKnown RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 POLBP06746 335 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 AKAP5P24588 427 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 SPARCL1Q14515 664 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 CNGA2Q16280 664 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 FSCBQ5H9T9 825 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 CDR2LQ86X02 465 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 SLC30A5Q8TAD4 765 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 PTPN18Q99952 460 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 GOLPH3Q9H4A6 298 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 DNAJC17Q9NVM6 304 aaKnown RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 BAG5Q9UL15 447 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 GABRQQ9UN88 632 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 GYPCP04921 128 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 USP17L7P0C7H9 530 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 CD52P31358 61 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 ITGA9Q13797 1035 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 C7orf61Q8IZ16 206 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 CARNMT1Q8N4J0 409 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 RIPOR3Q96MK2 946 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 ARHGAP39Q9C0H5 1083 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 ATXN3LQ9H3M9 355 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 SLC28A3Q9HAS3 691 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 SMYD2Q9NRG4 433 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 GLUD1P00367 558 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 COMTP21964 271 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 SCNN1GP51170 649 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 PDIA2Q13087 525 aaKnown RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 ARMC6Q6NXE6 501 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 VSTM1Q6UX27 236 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 TAB3Q8N5C8 712 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 SPDYE1Q8NFV5 336 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 FAM172AQ8WUF8 416 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 EMID1Q96A84 441 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 C11orf84Q9BUA3 381 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-203ENST00000393287 NDE1Q9NXR1 346 aa8.42□□□□□ -1.06
ATXN3-203ENST00000393287 TTC4O95801 387 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 IGSF6O95976 241 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 SPATA31C1P0DKV0 1188 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 YWHAZP63104 245 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 EFEMP1Q12805 493 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 MMEL1Q495T6 779 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TFDP3Q5H9I0 405 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 CAPN12Q6ZSI9 719 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 SUGP1Q8IWZ8 645 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TC2NQ8N9U0 490 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 GIMAP7Q8NHV1 300 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TPCN2Q8NHX9 752 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TTPALQ9BTX7 342 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 FOXN3O00409 490 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ATP5BP06576 529 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 CXCR5P32302 372 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 CHKAP35790 457 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 HECTD3Q5T447 861 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TTC19Q6DKK2 380 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 TBC1D1Q86TI0 1168 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 CRLF3Q8IUI8 442 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 SH3KBP1Q96B97 665 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 WDR70Q9NW82 654 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 NDUFS3O75489 264 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 CD44P16070 742 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 EPHB2P29323 1055 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 IFNA8P32881 189 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 HADHAP40939 763 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 FAM187BQ17R55 369 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 DDI1Q8WTU0 396 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 MCCC1Q96RQ3 725 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 DAB1O75553 588 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ARHGAP1Q07960 439 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 NAB1Q13506 487 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 PDE12Q6L8Q7 609 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ANO5Q75V66 913 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 C17orf53Q8N3J3 647 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 PABPC5Q96DU9 382 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 GAD1Q99259 594 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ZCCHC2Q9C0B9 1178 aaKnown RBP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 FGFR1OP2Q9NVK5 253 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ARHGEF38Q9NXL2 777 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 GTF2IRD1Q9UHL9 959 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 MAFFQ9ULX9 164 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 ZNF839A8K0R7 811 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 BTNL10A8MVZ5 291 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 DNAJC6O75061 913 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 MMEP08473 750 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 NPR3P17342 541 aa8.41□□□□□ -1.06
ATXN3-203ENST00000393287 DDX6P26196 483 aaKnown RBP eCLIP8.41□□□□□ -1.06
ATXN3-203ENST00000393287 CNTFP26441 200 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms