RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ADRA1DP25100 572 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SLC5A2P31639 672 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 HNRNPH3P31942 346 aaKnown RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ETV3P41162 512 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 TNNI2P48788 182 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ARL4CP56559 192 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 TXNRD1Q16881 649 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 COBLL1Q53SF7 1204 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SDE2Q6IQ49 451 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 SETD3Q86TU7 594 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 LRRC20Q8TCA0 184 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 APOL6Q9BWW8 343 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 POLR1BQ9H9Y6 1135 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 CLK4Q9HAZ1 481 aaKnown RBP7.91□□□□□ -1.14
VTI1A-201ENST00000393077 NEK6Q9HC98 313 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 GINM1Q9NU53 330 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 ADA2Q9NZK5 511 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 STK39Q9UEW8 545 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 PNPLA7Q6ZV29 1317 aa7.91□□□□□ -1.14
VTI1A-201ENST00000393077 PEAK1Q9H792 1746 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 INO80B-WBP1J3KQ70 363 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 VILLO15195 856 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 FOXP2O15409 715 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 TLR2O60603 784 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-201ENST00000393077 AQP5P55064 265 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 OLR1P78380 273 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 SF3B4Q15427 424 aaKnown RBP eCLIP7.9□□□□□ -1.14
VTI1A-201ENST00000393077 LDLRAP1Q5SW96 308 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 DNAAF5Q86Y56 855 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-201ENST00000393077 C10orf82Q8WW14 230 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 HTRA1Q92743 480 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 PGBD4Q96DM1 585 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 FAM84BQ96KN1 310 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-201ENST00000393077 B3GALT6Q96L58 329 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 AIFM2Q9BRQ8 373 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 HERC2P3Q9BVR0 1158 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 ADAM7Q9H2U9 754 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 CXorf21Q9HAI6 301 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 GDAP2Q9NXN4 497 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 QPCTLQ9NXS2 382 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 SLC7A8Q9UHI5 535 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 PCDHB13Q9Y5F0 798 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 H0Y626 953 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 ACTN1P12814 892 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 LIFRP42702 1097 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 MRPS22P82650 360 aaKnown RBP7.9□□□□□ -1.14
VTI1A-201ENST00000393077 DAB2P98082 770 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 ATP2C1P98194 919 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-201ENST00000393077 ECT2LQ008S8 904 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 MGAT5Q09328 741 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 MOGQ16653 247 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 KLHL38Q2WGJ6 581 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 GLYCTKQ8IVS8 523 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 DYNLL2Q96FJ2 89 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 BTBD6Q96KE9 485 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 NLRP4Q96MN2 994 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 MIPEPQ99797 713 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 PNPLA3Q9NST1 481 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 COPG2Q9UBF2 871 aa7.9□□□□□ -1.14
VTI1A-201ENST00000393077 ANKRD26Q9UPS8 1709 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 SMCO2A6NFE2 343 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 C16orf96A6NNT2 1141 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 CLDN25C9JDP6 229 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 CCNT1O60563 726 aaKnown RBP7.9□□□□□ -1.15
VTI1A-201ENST00000393077 TCN1P20061 433 aaPredicted RBP7.9□□□□□ -1.15
VTI1A-201ENST00000393077 TECP42680 631 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 IL12RB1P42701 662 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 ARPP19P56211 112 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 KLRC3Q07444 240 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 KRR1Q13601 381 aaKnown RBP7.9□□□□□ -1.15
VTI1A-201ENST00000393077 PKN2Q16513 984 aaKnown RBP7.9□□□□□ -1.15
VTI1A-201ENST00000393077 PHKG1Q16816 387 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 BBS9Q3SYG4 887 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 ZFP69Q49AA0 526 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF772Q68DY9 489 aaPredicted RBP7.9□□□□□ -1.15
VTI1A-201ENST00000393077 SIGIRRQ6IA17 410 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 CHADLQ6NUI6 762 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 ANKRD13BQ86YJ7 626 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 IRF2BP1Q8IU81 584 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 POC5Q8NA72 575 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 TTC13Q8NBP0 860 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 PNMA1Q8ND90 353 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 PMEPA1Q969W9 287 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 FAM111AQ96PZ2 611 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 CALN1Q9BXU9 219 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 NMUR2Q9GZQ4 415 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 FAM96AQ9H5X1 160 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 RUBCNLQ9H714 662 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 SIAEQ9HAT2 523 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 WHRNQ9P202 907 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 USTQ9Y2C2 406 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 SNX9Q9Y5X1 595 aa7.9□□□□□ -1.15
VTI1A-201ENST00000393077 PPEF1O14829 653 aaPredicted RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 PHGDHO43175 533 aaKnown RBP7.89□□□□□ -1.15
VTI1A-201ENST00000393077 AQP9O43315 295 aa7.89□□□□□ -1.15
VTI1A-201ENST00000393077 BBOX1O75936 387 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms