RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 CDH8P55286 799 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 PTK7Q13308 1070 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 KLF1Q13351 362 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 TCEAL1Q15170 157 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TFDP3Q5H9I0 405 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ANKRD22Q5VYY1 191 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 SLC30A9Q6PML9 568 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 EMC1Q8N766 993 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 INPP5DQ92835 1189 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 NSL1Q96IY1 281 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TMEM120AQ9BXJ8 343 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 STYXL1Q9Y6J8 313 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 GLTPD2A6NH11 291 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 TCEA3O75764 348 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 CIB2O75838 187 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ZCCHC18P0CG32 403 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 MYL2P10916 166 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 KLRC2P26717 231 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 CCDC15Q0P6D6 951 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 CDO1Q16878 200 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 FAXCQ5TGI0 409 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ANO7Q6IWH7 933 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ZNF677Q86XU0 584 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 C10orf82Q8WW14 230 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 SLC7A6OSQ96CW6 309 aaPredicted RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 RPF1Q9H9Y2 349 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 MAD1L1Q9Y6D9 718 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 OTOFQ9HC10 1997 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 B2RBV5 119 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 COPEO14579 308 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 MAP3K7O43318 606 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 PYGBP11216 843 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 MRPS35P82673 323 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 SCYL2Q6P3W7 929 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 MPZL3Q6UWV2 235 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 UCMAQ8WVF2 138 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 SCG3Q8WXD2 468 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 ANKRD36BP1Q96IX9 119 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 GBP5Q96PP8 586 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 C2orf40Q9H1Z8 148 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 CISHQ9NSE2 258 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 DNAJC25-GNG10A0A024R161 153 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 IQCA1LA6NCM1 817 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 T-ENOLP0DO92 83 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ATP6V1C1P21283 382 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ACO1P21399 889 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 TBXAS1P24557 533 aaPredicted RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 VHLP40337 213 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 RBBP5Q15291 538 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 HADHQ16836 314 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 KLHL38Q2WGJ6 581 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 PRAMEF19Q5SWL8 479 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 RNF220Q5VTB9 566 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 SLC25A41Q8N5S1 370 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 DDX50Q9BQ39 737 aaKnown RBP11.31□□□□□ -0.6
BRF1-204ENST00000392557 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
BRF1-204ENST00000392557 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 IQANK1A0A1B0GTG1 560 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
BRF1-204ENST00000392557 PIGRP01833 764 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 LMNAP02545 664 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 GDF10P55107 478 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 SLC45A4Q5BKX6 768 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 FNBP1LQ5T0N5 605 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 TRIM72Q6ZMU5 477 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 PLPPR4Q7Z2D5 763 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 BTBD10Q9BSF8 475 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 CADM1Q9BY67 442 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 MCF2LO15068 1137 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 CELF2O95319 508 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 CALB1P05937 261 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 NFICP08651 508 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 ABHD2P08910 425 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 FGFR1P11362 822 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 GCAP28676 217 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 EIF3EP60228 445 aaKnown RBP11.3□□□□□ -0.6
BRF1-204ENST00000392557 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 CFAP157Q5JU67 520 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 WDR49Q8IV35 697 aa11.3□□□□□ -0.6
BRF1-204ENST00000392557 ARID3BQ8IVW6 561 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms