RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 MMRN2Q9H8L6 949 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 GMIPQ9P107 970 aa17.6■□□□□ 0.41
PTPRK-208ENST00000392449 FAM237AA0A1B0GTK4 181 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 K7EQS6 105 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 DCLK1O15075 740 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 AKAP3O75969 853 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 PFKLP17858 780 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 SLC6A11P48066 632 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 PPP3CCP48454 512 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 GCLMP48507 274 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 NR1H3Q13133 447 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 DMC1Q14565 340 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 FBXO43Q4G163 708 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 C2orf27AQ580R0 203 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 PRR23CQ6ZRP0 262 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 TMC2Q8TDI7 906 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 TMEM174Q8WUU8 243 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 WBP2Q969T9 261 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 EEF2KMTQ96G04 330 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 SMARCD1Q96GM5 515 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 TNIP3Q96KP6 325 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 ZFRQ96KR1 1074 aaKnown RBP17.59■□□□□ 0.41
PTPRK-208ENST00000392449 TWNKQ96RR1 684 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 SMOC1Q9H4F8 434 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 DMAP1Q9NPF5 467 aaPredicted RBP17.59■□□□□ 0.41
PTPRK-208ENST00000392449 TRAF3IP3Q9Y228 551 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 FRMD4BQ9Y2L6 1034 aa17.59■□□□□ 0.41
PTPRK-208ENST00000392449 ATP8B3O60423 1300 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 LAMA1P25391 3075 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 PRR5-ARHGAP8B1AHC4 643 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 CALUO43852 315 aaPredicted RBP17.58■□□□□ 0.41
PTPRK-208ENST00000392449 RHOBTB3O94955 611 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 RTN3O95197 1032 aaPredicted RBP17.58■□□□□ 0.41
PTPRK-208ENST00000392449 ASS1P00966 412 aaKnown RBP17.58■□□□□ 0.41
PTPRK-208ENST00000392449 NR2F2P24468 414 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 VAMP7P51809 220 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 ARHGAP8P85298 464 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 PPP3CAQ08209 521 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 DHCR24Q15392 516 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 SF3A2Q15428 464 aaKnown RBP17.58■□□□□ 0.41
PTPRK-208ENST00000392449 CSRP2Q16527 193 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 SGSM1Q2NKQ1 1148 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 KRBA2Q6ZNG9 492 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 SYT13Q7L8C5 426 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 GPRIN1Q7Z2K8 1008 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 SMYD4Q8IYR2 804 aaPredicted RBP17.58■□□□□ 0.41
PTPRK-208ENST00000392449 ADGRG2Q8IZP9 1017 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 TAS1R2Q8TE23 839 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 JAKMIP2Q96AA8 810 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 ARRDC1-AS1Q9H2J1 176 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 APOBEC3GQ9HC16 384 aaKnown RBP17.58■□□□□ 0.41
PTPRK-208ENST00000392449 ZDHHC4Q9NPG8 344 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 INVSQ9Y283 1065 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.41
PTPRK-208ENST00000392449 MYL1P05976 194 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 ADORA2BP29275 332 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 MAP3K7CLP57077 242 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 RHBDF2Q6PJF5 856 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 CCDC33Q8N5R6 958 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 USP33Q8TEY7 942 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 RXFP3Q9NSD7 469 aa17.57■□□□□ 0.4
PTPRK-208ENST00000392449 LRP3O75074 770 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 IRF1P10914 325 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 P4HA1P13674 534 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 KDSRQ06136 332 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 HECTD3Q5T447 861 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 CACNA2D4Q7Z3S7 1137 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 CAMKK1Q8N5S9 505 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 EXOC4Q96A65 974 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 TPSD1Q9BZJ3 242 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 IL37Q9NZH6 218 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 CCDC163A0A0D9SF12 145 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 IKBKBO14920 756 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 ZNF202O95125 648 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 APBB3O95704 486 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 TBX18O95935 607 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 HNRNPLP14866 589 aaKnown RBP eCLIP17.56■□□□□ 0.44e-7■□□□□ 9.7
PTPRK-208ENST00000392449 CD58P19256 250 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 LY6G5CQ5SRR4 150 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 FAM186BQ8IYM0 893 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 CRYBG2Q8N1P7 616 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 PDZD8Q8NEN9 1154 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 OVCA2Q8WZ82 227 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 ACDQ96AP0 544 aa17.56■□□□□ 0.4
PTPRK-208ENST00000392449 A0A1W2PQ27 194 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 A0A1W2PQ64 194 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 A0A1W2PQD8 194 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 CYP26A1O43174 497 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 ZDHHC11BP0C7U3 371 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 CHRM1P11229 460 aaPredicted RBP17.55■□□□□ 0.4
PTPRK-208ENST00000392449 ADH5P11766 374 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 DGKEP52429 567 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 ZCWPW2Q504Y3 356 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 EMC10Q5UCC4 262 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 BBS7Q8IWZ6 715 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 NAT16Q8N8M0 369 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 TSTD1Q8NFU3 115 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 NETO1Q8TDF5 533 aa17.55■□□□□ 0.4
PTPRK-208ENST00000392449 TAF4BQ92750 862 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms