RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 NUGGCQ68CJ6 796 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 TBC1D1Q86TI0 1168 aaPredicted RBP20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 MGARPQ8TDB4 240 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 ATG4AQ8WYN0 398 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 GRAMD1AQ96CP6 724 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 MRPL45Q9BRJ2 306 aaKnown RBP20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 ECT2Q9H8V3 914 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 EBF2Q9HAK2 575 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 MIOSQ9NXC5 875 aa20.82■□□□□ 0.92
CSNK1D-203ENST00000392334 SPTLC1O15269 473 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 CILPO75339 1184 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 PROSCO94903 275 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 KCNE1P15382 129 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 RRM1P23921 792 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 NDST1P52848 882 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 COPS2P61201 443 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 YWHAEP62258 255 aaKnown RBP20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 XKR4Q5GH76 650 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 FAM26DQ5JW98 314 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 ARHGEF18Q6ZSZ5 1173 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 CCDC89Q8N998 374 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 SLC4A11Q8NBS3 891 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 RXFP1Q9HBX9 757 aa20.81■□□□□ 0.92
CSNK1D-203ENST00000392334 SCN1AP35498 2009 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 HCRTO43612 131 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 TLE2Q04725 743 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 MPP2Q14168 576 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 RNF43Q68DV7 783 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 PPP1R21Q6ZMI0 780 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 AGMOQ6ZNB7 445 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 GSTCDQ8NEC7 633 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 TMEM176AQ96HP8 235 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 HEXIM2Q96MH2 286 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 CCDC77Q9BR77 488 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 KCNK9Q9NPC2 374 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 CTNNAL1Q9UBT7 734 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 ADCY8P40145 1251 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 SKIV2L2P42285 1042 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 CCDC15Q0P6D6 951 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 FAAP100Q0VG06 881 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 MON1BQ7L1V2 547 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 ANKRD33Q7Z3H0 272 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 PCDH10Q9P2E7 1040 aa20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 R3HDM2Q9Y2K5 976 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-203ENST00000392334 ARL5CA6NH57 179 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 PIRO00625 290 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 E2F5Q15329 346 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 DENND1BQ6P3S1 775 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 RHOT1Q8IXI2 618 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 KATNAL2Q8IYT4 538 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 WDTC1Q8N5D0 677 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 C12orf29Q8N999 325 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 ANKRD42Q8N9B4 389 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 SEZ6LQ9BYH1 1024 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 TRIM7Q9C029 511 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 CYP3A43Q9HB55 503 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 ARHGEF3Q9NR81 526 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 ADAM22Q9P0K1 906 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 BARX2Q9UMQ3 279 aaPredicted RBP20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 NAALADL1Q9UQQ1 740 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 ATP11BQ9Y2G3 1177 aa20.79■□□□□ 0.92
CSNK1D-203ENST00000392334 SCNN1GP51170 649 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 SF3A3Q12874 501 aaKnown RBP eCLIP20.78■□□□□ 0.923e-7■■■□□ 16.8
CSNK1D-203ENST00000392334 TRIM72Q6ZMU5 477 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 ANKLE1Q8NAG6 615 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 PPP1R10Q96QC0 940 aaKnown RBP20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 TGS1Q96RS0 853 aaKnown RBP20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 LPIN3Q9BQK8 851 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 C11orf49Q9H6J7 331 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 NKIRAS1Q9NYS0 192 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 KPNA7A9QM74 516 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 STAU1O95793 577 aaKnown RBP20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 EN2P19622 333 aaPredicted RBP20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 STX2P32856 288 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 SOWAHAQ2M3V2 549 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 LRRC8DQ7L1W4 858 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 ASRGL1Q7L266 308 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 CYP4X1Q8N118 509 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 LRRC52Q8N7C0 313 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 TET1Q8NFU7 2136 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 N4BP2L2Q92802 583 aaPredicted RBP20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 VCPIP1Q96JH7 1222 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 NME7Q9Y5B8 376 aa20.78■□□□□ 0.92
CSNK1D-203ENST00000392334 XPOTO43592 962 aaKnown RBP20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 POMCP01189 267 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 RALAP11233 206 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 ATF7P17544 494 aaPredicted RBP20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 KLRC2P26717 231 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 KCNJ2P63252 427 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 NR1H3Q13133 447 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 GPNMBQ14956 572 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 LLGL1Q15334 1064 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 TRIP13Q15645 432 aaPredicted RBP20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 LRRC26Q2I0M4 334 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 LIN9Q5TKA1 542 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 IZUMO3Q5VZ72 239 aa20.77■□□□□ 0.92
CSNK1D-203ENST00000392334 CGB2Q6NT52 195 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms