RNA–Protein interactions for RNA: ENST00000390917.1

RNU6-604P-201, Transcript of RNA, U6 small nuclear 604, pseudogene, humanhuman

BASIC

Gene RNU6-604P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-604P-201ENST00000390917 MRPL58Q14197 206 aaKnown RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 PLCB4Q15147 1175 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 HLFQ16534 295 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 ST3GAL2Q16842 350 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 PLEKHO1Q53GL0 409 aaPredicted RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 AWAT1Q58HT5 328 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 RNASE12Q5GAN4 147 aaKnown RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 TCTEX1D4Q5JR98 221 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 TMEM65Q6PI78 240 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 VSTM1Q6UX27 236 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 METTL7BQ6UX53 244 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 LRRTM1Q86UE6 522 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 PQLC1Q8N2U9 271 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 GRAPLQ8TC17 118 aaPredicted RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 RASGRP4Q8TDF6 673 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 ZNF721Q8TF20 911 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 RTF1Q92541 710 aaKnown RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 MSI2Q96DH6 328 aaKnown RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 KLHL32Q96NJ5 620 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 IL17FQ96PD4 163 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 LENG8Q96PV6 779 aaPredicted RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 LITAFQ99732 161 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 MYOCQ99972 504 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 RBM4BQ9BQ04 359 aaKnown RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 TUBA1CQ9BQE3 449 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 ZNF518BQ9C0D4 1074 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 PAPOLBQ9NRJ5 636 aaKnown RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 ANAPC11Q9NYG5 84 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 PRSS50Q9UI38 385 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 AJAP1Q9UKB5 411 aaPredicted RBP0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 FZD10Q9ULW2 581 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 GABRQQ9UN88 632 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 AGAP1Q9UPQ3 857 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 NUMBLQ9Y6R0 609 aa0.05□□□□□ -2.4
RNU6-604P-201ENST00000390917 A0A1W2PPI3 338 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 SPRY3O43610 288 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 PRKNO60260 465 aaPredicted RBP0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 USP12O75317 370 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 SLC43A1O75387 559 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 MT-CO3P00414 261 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 PRKCBP05771 671 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 RXRAP19793 462 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 FPR1P21462 350 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 CD40P25942 277 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 IRX1P78414 480 aaPredicted RBP0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 CREMQ03060 361 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 PAK2Q13177 524 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 VPS53Q5VIR6 699 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 RANBP10Q6VN20 620 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 EPHX4Q8IUS5 362 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 C16orf71Q8IYS4 520 aaPredicted RBP0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 LRRC47Q8N1G4 583 aaKnown RBP0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 CHST14Q8NCH0 376 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 ENGASEQ8NFI3 743 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 BCAS4Q8TDM0 211 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 GPRASP2Q96D09 838 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 ANAPC16Q96DE5 110 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 LRIG1Q96JA1 1093 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 FOXN4Q96NZ1 517 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 ASCL2Q99929 193 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 SCNM1Q9BWG6 230 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 NYAP2Q9P242 653 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 AGO2Q9UKV8 859 aaKnown RBP0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 CSAG2Q9Y5P2 127 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 CDY2AQ9Y6F7 541 aa0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 ZNF335Q9H4Z2 1342 aaPredicted RBP0.04□□□□□ -2.4
RNU6-604P-201ENST00000390917 COL16A1Q07092 1604 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 TRBV5-3A0A0A0MS03 114 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 A0A1W2PPC1 479 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 INAFM1C9JVW0 142 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 M0R2C6 588 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 AKR1B10O60218 316 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 GPR32O75388 356 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 ALOX5P09917 674 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 DGKAP23743 735 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 GATA2P23769 480 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 NASPP49321 788 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 SLC12A2P55011 1212 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 PER3P56645 1201 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 TUBA1BP68363 451 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 TBX2Q13207 712 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 KCNB1Q14721 858 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 ACCSLQ4AC99 568 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 ZNF394Q53GI3 561 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 CC2D1BQ5T0F9 858 aaKnown RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 GPR157Q5UAW9 335 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 FAM180AQ6UWF9 173 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 Q6ZR54 194 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 Q6ZVL8 140 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 PNMA8AQ86V59 439 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 SLC41A1Q8IVJ1 513 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 CLIP4Q8N3C7 705 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 SRBD1Q8N5C6 995 aaKnown RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 IGSF22Q8N9C0 903 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 C7orf57Q8NEG2 295 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 XAGE5Q8WWM1 108 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 USP13Q92995 863 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 R3HDM4Q96D70 268 aa0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 ZNF668Q96K58 619 aaPredicted RBP0.03□□□□□ -2.4
RNU6-604P-201ENST00000390917 FIZ1Q96SL8 496 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms