RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CGAP01215 116 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 FTLP02792 175 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CSF1RP07333 972 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 GRPP07492 148 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CD63P08962 238 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MYBL2P10244 700 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 FGF3P11487 239 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CREB1P16220 341 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CNGA1P29973 690 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 LRPAP1P30533 357 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ARRB2P32121 409 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 GKP32189 559 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MLH1P40692 756 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 IARSP41252 1262 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 DIO1P49895 249 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PDE6CP51160 858 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 P2RX3P56373 397 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 RPL36AP83881 106 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CFHR1Q03591 330 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SRSF1Q07955 248 aaKnown RBP eCLIP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 NOGQ13253 232 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 KCNB1Q14721 858 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MFSD13AQ14CX5 517 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 LARS2Q15031 903 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MLC1Q15049 377 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCBP2Q15366 365 aaKnown RBP eCLIP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PFKFB3Q16875 520 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 FAM110CQ1W6H9 321 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CCDC157Q569K6 752 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 EARS2Q5JPH6 523 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 RNF219Q5W0B1 726 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PDXDC1Q6P996 788 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 VSTM1Q6UX27 236 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 NPNTQ6UXI9 565 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF793Q6ZN11 406 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 RFX8Q6ZV50 586 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PTCHD4Q6ZW05 846 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 HEATR3Q7Z4Q2 680 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 JAZF1Q86VZ6 243 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SPATS2Q86XZ4 545 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SPATA2LQ8IUW3 424 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ABRAQ8N0Z2 381 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 AFAP1L2Q8N4X5 818 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 IQCF1Q8N6M8 205 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CNTD1Q8N815 330 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 C1orf162Q8NEQ5 155 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ATL2Q8NHH9 583 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MAFAQ8NHW3 353 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 LMO3Q8TAP4 145 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 BRIX1Q8TDN6 353 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CHAC2Q8WUX2 184 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 OIT3Q8WWZ8 545 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TEKT5Q96M29 485 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MOGAT1Q96PD6 335 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 C17orf80Q9BSJ5 609 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ARHGAP39Q9C0H5 1083 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SLKQ9H2G2 1235 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 WDCPQ9H6R7 721 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CXorf36Q9H7Y0 433 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 GBA2Q9HCG7 927 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM8AQ9HCN3 771 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PLSCR4Q9NRQ2 329 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 DECR2Q9NUI1 292 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 LMBRD1Q9NUN5 540 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM45AQ9NWC5 275 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 XPR1Q9UBH6 696 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MGAT4CQ9UBM8 478 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 FEZ2Q9UHY8 353 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SERPINB13Q9UIV8 391 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MAFFQ9ULX9 164 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ICAM5Q9UMF0 924 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHA6Q9UN73 950 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 USP22Q9UPT9 525 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SHOC2Q9UQ13 582 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHGA9Q9Y5G4 932 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHGA8Q9Y5G5 932 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHGA7Q9Y5G6 932 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHGA6Q9Y5G7 932 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHGA3Q9Y5H0 932 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 SNX14Q9Y5W7 946 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MRFAP1Q9Y605 127 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 FER1L4A9Z1Z3 1794 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 C2CD4BA6NLJ0 364 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF814B7Z6K7 855 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 FOXN3O00409 490 aaPredicted RBP0.72□□□□□ -2.29
SNORD28-201ENST00000384706 FYB1O15117 783 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 INPPL1O15357 1258 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 TMPRSS11DO60235 418 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 UGDHO60701 494 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 EPN2O95208 641 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 ARIH2O95376 493 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 PLGP00747 810 aaPredicted RBP0.72□□□□□ -2.29
SNORD28-201ENST00000384706 FGF2P09038 288 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 ACAA1P09110 424 aaPredicted RBP0.72□□□□□ -2.29
SNORD28-201ENST00000384706 CYP2C9P11712 490 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 APEHP13798 732 aaKnown RBP0.72□□□□□ -2.29
SNORD28-201ENST00000384706 TYRP14679 529 aa0.72□□□□□ -2.29
SNORD28-201ENST00000384706 ATF7P17544 494 aaPredicted RBP0.72□□□□□ -2.29
SNORD28-201ENST00000384706 PDCP20941 246 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms