RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ARHGAP18Q8N392 663 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 STMN2Q93045 179 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 PWWP2AQ96N64 755 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 NR1H4Q96RI1 486 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 MIPEPQ99797 713 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 FDXACB1Q9BRP7 624 aaPredicted RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 CADM1Q9BY67 442 aaKnown RBP9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TRIM55Q9BYV6 548 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 TRIM4Q9C037 500 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 SHOC2Q9UQ13 582 aa9.35□□□□□ -0.91
GPNMB-202ENST00000381990 ANK1P16157 1881 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 ALOX15BO15296 676 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 GYG2O15488 501 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 GSC2O15499 205 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 AP1G2O75843 785 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 HAUS5O94927 633 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 IL18RAPO95256 599 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 TGDSO95455 350 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 SH3BGRP55822 239 aaPredicted RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 RCN2Q14257 317 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 SEPT7Q16181 437 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 PKN2Q16513 984 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 AMHR2Q16671 573 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 LVRNQ6Q4G3 990 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 CENPUQ71F23 418 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 MCUR1Q96AQ8 359 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 PTCD3Q96EY7 689 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 HERPUD2Q9BSE4 406 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 MTMR12Q9C0I1 747 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 MRPL47Q9HD33 250 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 NPHS2Q9NP85 383 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 MTO1Q9Y2Z2 717 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 PCDHB4Q9Y5E5 795 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 RRN3P2A6NIE6 340 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 POC1B-GALNT4F8VUJ3 575 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 CAPN9O14815 690 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 ADCY6O43306 1168 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 TJP3O95049 919 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 PSMG1O95456 288 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 CST3P01034 146 aaPredicted RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 VTNP04004 478 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 TMEM191BP0C7N4 346 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 MCF2P10911 925 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 PHBP35232 272 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 GEMIN4P57678 1058 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 SLC1A5Q15758 541 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 DAB2IPQ5VWQ8 1189 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 FAM91A1Q658Y4 838 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 TRIM72Q6ZMU5 477 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 C4orf33Q8N1A6 199 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 SMC1BQ8NDV3 1235 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 DTNBP1Q96EV8 351 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 NSL1Q96IY1 281 aa9.34□□□□□ -0.91
GPNMB-202ENST00000381990 ZNF184Q99676 751 aaPredicted RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 RPF1Q9H9Y2 349 aaKnown RBP9.34□□□□□ -0.91
GPNMB-202ENST00000381990 UMODL1Q5DID0 1318 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 A6NJR5 290 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 F8W8V4 182 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 MAP3K7O43318 606 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 IL1BP01584 269 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 TNNC2P02585 160 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 KRT4P19013 534 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 NSFP46459 744 aaKnown RBP9.33□□□□□ -0.92
GPNMB-202ENST00000381990 TRPC3Q13507 836 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 MARCH8Q5T0T0 291 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 CDR2LQ86X02 465 aaPredicted RBP9.33□□□□□ -0.92
GPNMB-202ENST00000381990 UBR7Q8N806 425 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 GATA6Q92908 595 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 ANKRD36BP1Q96IX9 119 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 VCPIP1Q96JH7 1222 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 DNAJB4Q9UDY4 337 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 EIF4E1BA6NMX2 242 aaKnown RBP9.33□□□□□ -0.92
GPNMB-202ENST00000381990 GPR25O00155 361 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 DYNC1LI2O43237 492 aaPredicted RBP9.33□□□□□ -0.92
GPNMB-202ENST00000381990 LIASO43766 372 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
GPNMB-202ENST00000381990 MYL6P60660 151 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 OSTNP61366 133 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 KYAT1Q16773 422 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 ACSBG2Q5FVE4 666 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 PPP1R15BQ5SWA1 713 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 LIN9Q5TKA1 542 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 RGMBQ6NW40 437 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 C17orf99Q6UX52 265 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 DSTYKQ6XUX3 929 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 PCGF5Q86SE9 256 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 ZC3H18Q86VM9 953 aaKnown RBP9.33□□□□□ -0.92
GPNMB-202ENST00000381990 KIAA0319LQ8IZA0 1049 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 VPS52Q8N1B4 723 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
GPNMB-202ENST00000381990 USP6NLQ92738 828 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms