RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 ESRRBO95718 433 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 MIPP30301 263 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 SPDYAQ5MJ70 313 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 BRSK2Q8IWQ3 736 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 SPATA17Q96L03 361 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PARK7Q99497 189 aaKnown RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 SPON1Q9HCB6 807 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 AVENQ9NQS1 362 aaPredicted RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 SETD4Q9NVD3 440 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 SLC30A1Q9Y6M5 507 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 CYB561D2O14569 222 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PSMD3O43242 534 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PPP1R11O60927 126 aaPredicted RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 MT-CO1P00395 513 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 ACAT1P24752 427 aaKnown RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 ADRA1DP25100 572 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 INPP1P49441 399 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 FLOT2Q14254 428 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 VEPH1Q14D04 833 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PBXIP1Q96AQ6 731 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 KATNAL1Q9BW62 490 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 RUBCNLQ9H714 662 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 CATSPERBQ9H7T0 1116 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 CYP3A7-CYP3A51PA0A087WV96 503 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 CBX6O95503 412 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 CYP3A7P24462 503 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 CYP2F1P24903 491 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PTPN7P35236 360 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 BCAT1P54687 386 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 FAM117BQ6P1L5 589 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 KAT2BQ92831 832 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 VCPIP1Q96JH7 1222 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 PRDM5Q9NQX1 630 aaPredicted RBP17.75■□□□□ 0.43
SGCB-201ENST00000381431 SNTG2Q9NY99 539 aa17.75■□□□□ 0.43
SGCB-201ENST00000381431 E9PBE3 544 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 KLHL41O60662 606 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 VSIG10LQ86VR7 867 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 HASPINQ8TF76 798 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 ADGRA2Q96PE1 1338 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
SGCB-201ENST00000381431 NIPA1Q7RTP0 329 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 STRA8Q7Z7C7 330 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 TRIM54Q9BYV2 358 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 SUFUQ9UMX1 484 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 ARHGAP26Q9UNA1 814 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 POTEAQ6S8J7 498 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 CES3Q6UWW8 571 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 TMEM161BQ8NDZ6 487 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 P2RX7Q99572 595 aaKnown RBP17.74■□□□□ 0.43
SGCB-201ENST00000381431 FRMD8P1Q9BZ68 369 aaPredicted RBP17.74■□□□□ 0.43
SGCB-201ENST00000381431 CYP3A43Q9HB55 503 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 IARS2Q9NSE4 1012 aaKnown RBP17.74■□□□□ 0.43
SGCB-201ENST00000381431 ARMCX1Q9P291 453 aa17.74■□□□□ 0.43
SGCB-201ENST00000381431 AKAP5P24588 427 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 ZNF157P51786 506 aaPredicted RBP17.73■□□□□ 0.43
SGCB-201ENST00000381431 MAP3K7CLP57077 242 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 MRPS35P82673 323 aaKnown RBP17.73■□□□□ 0.43
SGCB-201ENST00000381431 THEMIS2Q5TEJ8 643 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 COLGALT1Q8NBJ5 622 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 PCYOX1LQ8NBM8 494 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 CALML6Q8TD86 181 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 BLOC1S5Q8TDH9 187 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 SLC16A10Q8TF71 515 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 SHC3Q92529 594 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 WNK4Q96J92 1243 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 TRPC7Q9HCX4 862 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 SUPT3HB4E1H0 165 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 SUPT3HO75486 399 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 RALBP11234 206 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 PLIN5Q00G26 463 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 ITGB3BPQ13352 177 aaPredicted RBP17.73■□□□□ 0.43
SGCB-201ENST00000381431 KRT33BQ14525 404 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 C10orf120Q5SQS8 335 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 C16orf89Q6UX73 402 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 ARHGAP18Q8N392 663 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 NAT9Q9BTE0 207 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 LRRC40Q9H9A6 602 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 SALL4Q9UJQ4 1053 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 BARX2Q9UMQ3 279 aaPredicted RBP17.73■□□□□ 0.43
SGCB-201ENST00000381431 AMPD1P23109 780 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 HUNKP57058 714 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 DGKZQ13574 1117 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 RRP1BQ14684 758 aaKnown RBP17.73■□□□□ 0.43
SGCB-201ENST00000381431 SGO1Q5FBB7 561 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 SLC30A9Q6PML9 568 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 ADGRF2Q8IZF7 708 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 TTC30BQ8N4P2 665 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 RPRD1AQ96P16 312 aaPredicted RBP17.73■□□□□ 0.43
SGCB-201ENST00000381431 DCLRE1BQ9H816 532 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 TGFB3P10600 412 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 TPH1P17752 444 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 CHRM3P20309 590 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 NFKBIAP25963 317 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 FMO1Q01740 532 aa17.73■□□□□ 0.43
SGCB-201ENST00000381431 AUHQ13825 339 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms