RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 RAB6CQ53S08 254 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 RSPO2Q6UXX9 243 aaPredicted RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 ADAT2Q7Z6V5 191 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 ZDHHC14Q8IZN3 488 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 CENPIQ92674 756 aaPredicted RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 KRT12Q99456 494 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 LRRC1Q9BTT6 524 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 OXCT2Q9BYC2 517 aaPredicted RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 RAB6CQ9H0N0 254 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 ABI2Q9NYB9 513 aaPredicted RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCM2-202ENST00000381112 USP18Q9UMW8 372 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 MRPL42Q9Y6G3 142 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 TCRBV7S2A1N4TA0A589 114 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 SART1O43290 800 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 DAB1O75553 588 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 TRUB2O95900 331 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 ZBED1O96006 694 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 FGBP02675 491 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 KRT1P04264 644 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 MATKP42679 507 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 ATP11AP98196 1134 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 SPOUT1Q5T280 376 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 ANKS1BQ7Z6G8 1248 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 SLC39A11Q8N1S5 342 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 FAM172AQ8WUF8 416 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 FAM149B1Q96BN6 582 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 RBM41Q96IZ5 413 aaKnown RBP20.56■□□□□ 0.88
CCM2-202ENST00000381112 ZNF558Q96NG5 402 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 PNKPQ96T60 521 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 HERPUD2Q9BSE4 406 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 PARD6BQ9BYG5 372 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 ZWILCHQ9H900 591 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 KLHL11Q9NVR0 708 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 PCSK1NQ9UHG2 260 aa20.56■□□□□ 0.88
CCM2-202ENST00000381112 USP17L7P0C7H9 530 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 TFE3P19532 575 aaPredicted RBP20.55■□□□□ 0.88
CCM2-202ENST00000381112 EPHB4P54760 987 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 CDO1Q16878 200 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 USP41Q3LFD5 358 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 GLE1Q53GS7 698 aaKnown RBP20.55■□□□□ 0.88
CCM2-202ENST00000381112 PM20D1Q6GTS8 502 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 VSTM1Q6UX27 236 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 CYP4V2Q6ZWL3 525 aaPredicted RBP20.55■□□□□ 0.88
CCM2-202ENST00000381112 BHLHA9Q7RTU4 235 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 CCDC50Q8IVM0 306 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 KLHL7Q8IXQ5 586 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 DEFB106AQ8N104 65 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 SCML4Q8N228 414 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 RAPGEF5Q92565 580 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 RNF25Q96BH1 459 aaPredicted RBP20.55■□□□□ 0.88
CCM2-202ENST00000381112 ACSF2Q96CM8 615 aaPredicted RBP20.55■□□□□ 0.88
CCM2-202ENST00000381112 SLITRK1Q96PX8 696 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 SLC2A13Q96QE2 648 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 PEBP4Q96S96 227 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 YME1L1Q96TA2 773 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 NCAPGQ9BPX3 1015 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 ADAM33Q9BZ11 813 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 NGRNQ9NPE2 291 aaKnown RBP20.55■□□□□ 0.88
CCM2-202ENST00000381112 CHST7Q9NS84 486 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 PCDHB5Q9Y5E4 795 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 USP3Q9Y6I4 520 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 VWA8A3KMH1 1905 aa20.55■□□□□ 0.88
CCM2-202ENST00000381112 GOLGA6L10A0A0M3HER8 536 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 TARSL2A2RTX5 802 aaKnown RBP20.54■□□□□ 0.88
CCM2-202ENST00000381112 YJEFN3A6XGL0 299 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 E7ENQ6 273 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 PI4K2BG5E9Z4 385 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 TNFRSF10BO14763 440 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 LAG3P18627 525 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 GRIK1P39086 918 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 HDAC4P56524 1084 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 GPR17Q13304 367 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 LLGL1Q15334 1064 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 SIX1Q15475 284 aaPredicted RBP20.54■□□□□ 0.88
CCM2-202ENST00000381112 SMTNL2Q2TAL5 461 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 HFE2Q6ZVN8 426 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 C7orf61Q8IZ16 206 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 PRELID2Q8N945 189 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 OSBPL8Q9BZF1 889 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 C3orf70A6NLC5 250 aaPredicted RBP20.54■□□□□ 0.88
CCM2-202ENST00000381112 ZBBXA8MT70 800 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 RARAP10276 462 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 RALAP11233 206 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 DESP17661 470 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 MAGEA11P43364 429 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 COPS2P61201 443 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 SMC1AQ14683 1233 aaKnown RBP20.54■□□□□ 0.88
CCM2-202ENST00000381112 SLC25A52Q3SY17 297 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 KCNT1Q5JUK3 1230 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 ZFYVE27Q5T4F4 411 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 CCDC70Q6NSX1 233 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 C8orf74Q6P047 294 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 PRSS55Q6UWB4 352 aaPredicted RBP20.54■□□□□ 0.88
CCM2-202ENST00000381112 MFSD7Q6UXD7 560 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 COLGALT1Q8NBJ5 622 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 CMASQ8NFW8 434 aaPredicted RBP20.54■□□□□ 0.88
CCM2-202ENST00000381112 HDAC7Q8WUI4 952 aa20.54■□□□□ 0.88
CCM2-202ENST00000381112 IRGQQ8WZA9 623 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms