RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RLN3Q8WXF3 142 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 MRPL45Q9BRJ2 306 aaKnown RBP17.01■□□□□ 0.31
VCX3A-201ENST00000381089 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 SH3BP1Q9Y3L3 701 aa17.01■□□□□ 0.31
VCX3A-201ENST00000381089 MORC2Q9Y6X9 1032 aaPredicted RBP17.01■□□□□ 0.31
VCX3A-201ENST00000381089 TCRBV21S2A2A0A5A6 115 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 TBC1D3BA6NDS4 549 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 A8MXQ7 604 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 AP5Z1O43299 807 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 CLSTN1O94985 981 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 MAPK8P45983 427 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 HDDC3Q8N4P3 179 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 PDILTQ8N807 584 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 CEP76Q8TAP6 659 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 CGRRF1Q99675 332 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 SCNM1Q9BWG6 230 aa17■□□□□ 0.31
VCX3A-201ENST00000381089 SCAMP3O14828 347 aaKnown RBP16.99■□□□□ 0.31
VCX3A-201ENST00000381089 CFIP05156 583 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 ENGP17813 658 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 SPINK2P20155 84 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 PTGER3P43115 390 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 KIR2DL1P43626 348 aaPredicted RBP16.99■□□□□ 0.31
VCX3A-201ENST00000381089 SNRPFP62306 86 aaKnown RBP16.99■□□□□ 0.31
VCX3A-201ENST00000381089 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 LY6G5CQ5SRR4 150 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 HECTD3Q5T447 861 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 SLC23A3Q6PIS1 610 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 SLC36A4Q6YBV0 504 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 C12orf40Q86WS4 652 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 RDH13Q8NBN7 331 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 B3GALNT2Q8NCR0 500 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 SYAP1Q96A49 352 aaPredicted RBP16.99■□□□□ 0.31
VCX3A-201ENST00000381089 CCDC127Q96BQ5 260 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 ZNF518BQ9C0D4 1074 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 NACA2Q9H009 215 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 CUEDC2Q9H467 287 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 DEC1Q9P2X7 70 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 WASF3Q9UPY6 502 aa16.99■□□□□ 0.31
VCX3A-201ENST00000381089 PHACTR2O75167 634 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 STAU1O95793 577 aaKnown RBP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 CST3P01034 146 aaPredicted RBP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 HNRNPLP14866 589 aaKnown RBP eCLIP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 ATICP31939 592 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 TUBP50607 506 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 ASIC1P78348 528 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 RPL6Q02878 288 aaKnown RBP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 CUL4AQ13619 759 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 PSMD6Q15008 389 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 DUOXA1Q1HG43 343 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 ANO4Q32M45 955 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 MAP7D1Q3KQU3 841 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 EMC10Q5UCC4 262 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 ZNF513Q8N8E2 541 aaPredicted RBP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 XXYLT1Q8NBI6 393 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 MED10Q9BTT4 135 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 DPEP3Q9H4B8 488 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 AGPAT3Q9NRZ7 376 aa16.98■□□□□ 0.31
VCX3A-201ENST00000381089 NXF1Q9UBU9 619 aaKnown RBP16.98■□□□□ 0.31
VCX3A-201ENST00000381089 UBE4BO95155 1302 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 ASCC3Q8N3C0 2202 aaKnown RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 A0A087X0B3 334 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 ANTXRLA6NF34 631 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 HOXC11O43248 304 aaPredicted RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 COCHO43405 550 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 ADAM23O75077 832 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 CYP2J2P51589 502 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 CYP24A1Q07973 514 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 STK38Q15208 465 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 FAM26FQ5R3K3 315 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 SDE2Q6IQ49 451 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 SFTPA1Q8IWL2 248 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 NAT16Q8N8M0 369 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 ZNF507Q8TCN5 953 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 TNIP3Q96KP6 325 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 DUSP9Q99956 384 aaKnown RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 B3GNT5Q9BYG0 378 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 TRIM9Q9C026 710 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 ZSCAN16Q9H4T2 348 aaPredicted RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 DMAP1Q9NPF5 467 aaPredicted RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 TMEM74BQ9NUR3 256 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 COMMD8Q9NX08 183 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 MBD1Q9UIS9 605 aaPredicted RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 PILRBQ9UKJ0 227 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 RALYQ9UKM9 306 aaKnown RBP16.97■□□□□ 0.31
VCX3A-201ENST00000381089 SLC6A14Q9UN76 642 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 NEUROG3Q9Y4Z2 214 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 PLXND1Q9Y4D7 1925 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 PI4KAP42356 2102 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 MYOFQ9NZM1 2061 aa16.97■□□□□ 0.31
VCX3A-201ENST00000381089 ATXN2Q99700 1313 aaKnown RBP16.96■□□□□ 0.31
VCX3A-201ENST00000381089 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 H0Y626 953 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 CLDN5O00501 218 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 TRIM16O95361 564 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 HOXB2P14652 356 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 SYT1P21579 422 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms