RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ATP9AO75110 1047 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 RALBP11234 206 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 PAX7P23759 505 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 RANBP1P43487 201 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 OXNAD1Q96HP4 312 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 TRIM62Q9BVG3 475 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 M0R2N6 131 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ANGPT2O15123 496 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 LIASO43766 372 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 FKBP6O75344 327 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ABHD2P08910 425 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 STAG3L1P0CL83 205 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ATP6V1B1P15313 513 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 CNTFP26441 200 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 MIPP30301 263 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 PDK4Q16654 411 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 NAPEPLDQ6IQ20 393 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 FAM131BQ86XD5 332 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ARHGEF38Q9NXL2 777 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 NSMCE4AQ9NXX6 385 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ZBBXA8MT70 800 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 APOC4-APOC2K7ER74 178 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 SLC25A27O95847 323 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 APOC2P02655 101 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 CDH8P55286 799 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 APBB2Q92870 758 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 SGF29Q96ES7 293 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 MRGBPQ9NV56 204 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 VWA5AO00534 786 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 AKAP10O43572 662 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 NFIL3Q16649 462 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 AMHR2Q16671 573 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ZACNQ401N2 412 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 IPMKQ8NFU5 416 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 PDCD6IPQ8WUM4 868 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 NCLNQ969V3 563 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 COG5Q9UP83 839 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 AP4E1Q9UPM8 1137 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 DRG1Q9Y295 367 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 E7ENQ6 273 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 M0QYT0 321 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 THRAP10827 490 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 ALADP13716 330 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 DPEP1P16444 411 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 CDC25CP30307 473 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 JAM2P57087 298 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 NCALDP61601 193 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 LAMTOR4Q0VGL1 99 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 TSTA3Q13630 321 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 IFNEQ86WN2 208 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 C12orf56Q8IXR9 622 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 SARS2Q9NP81 518 aaKnown RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-204ENST00000380756 TCRBV7S2A1N4TA0A589 114 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 APOA4P06727 396 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 CPA3P15088 417 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 CDK16Q00536 496 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 FRA10AC1Q70Z53 315 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 SLFN11Q7Z7L1 901 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 PCYOX1LQ8NBM8 494 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 SOX13Q9UN79 622 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 DNM1LO00429 736 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 CSDE1O75534 798 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 SEC24DO94855 1032 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 RPS12P25398 132 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 RPL7AP62424 266 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 CXCL9Q07325 125 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 INPP5AQ14642 412 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 SHROOM1Q2M3G4 852 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 CCDC60Q8IWA6 550 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 SPON2Q9BUD6 331 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 LRRC40Q9H9A6 602 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 UBIAD1Q9Y5Z9 338 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 MGEA5O60502 916 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 PIAS1O75925 651 aa13.16□□□□□ -0.3
DNMT3A-204ENST00000380756 NPTXRO95502 500 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms