RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ANKRD52Q8NB46 1076 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 SOCS4Q8WXH5 440 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 SEC16BQ96JE7 1060 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 PEBP4Q96S96 227 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 PRMT1Q99873 361 aaKnown RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 GRAP2O75791 330 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 DRD4P21917 467 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 PHBP35232 272 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 ROR1Q01973 937 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 BIRC2Q13490 618 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 NOMO1Q15155 1222 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 TAF5Q15542 800 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 C6orf89Q6UWU4 347 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 ZBED8Q8IZ13 594 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 C7orf31Q8N865 590 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 ANKS4BQ8N8V4 417 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 RNF157Q96PX1 679 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 TACO1Q9BSH4 297 aaKnown RBP13.18□□□□□ -0.3
VPS16-202ENST00000380445 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 KCNK9Q9NPC2 374 aa13.18□□□□□ -0.3
VPS16-202ENST00000380445 SCN1AP35498 2009 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 BRAFP15056 766 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 ATP11AP98196 1134 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 PDIA2Q13087 525 aaKnown RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 IFT88Q13099 833 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 QPCTQ16769 361 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 CCDC142Q17RM4 750 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TRNP1Q6NT89 227 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 SCYL2Q6P3W7 929 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 DARS2Q6PI48 645 aaKnown RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 ARHGEF18Q6ZSZ5 1173 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 FAM172AQ8WUF8 416 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 APBA2Q99767 749 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 VPS37BQ9H9H4 285 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 ZNF487B1APH4 448 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 MDM4O15151 490 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 PAPSS1O43252 624 aaPredicted RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 HUS1O60921 280 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 CYP2B6P20813 491 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TGM2P21980 687 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 RPL22P35268 128 aaKnown RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 ZNF157P51786 506 aaPredicted RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 GDF10P55107 478 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 RASA2Q15283 850 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 CST9Q5W186 159 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TAF2Q6P1X5 1199 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 CYP4V2Q6ZWL3 525 aaPredicted RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 CCDC13Q8IYE1 715 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 CPT1BQ92523 772 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 PIWIL1Q96J94 861 aaKnown RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 CTNNAL1Q9UBT7 734 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 TBK1Q9UHD2 729 aa13.17□□□□□ -0.3
VPS16-202ENST00000380445 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.17□□□□□ -0.3
VPS16-202ENST00000380445 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.16□□□□□ -0.3
VPS16-202ENST00000380445 CFAP69A5D8W1 941 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS16-202ENST00000380445 KPNA6O60684 536 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 PTPN9P43378 593 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 SLC8A3P57103 927 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
VPS16-202ENST00000380445 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
VPS16-202ENST00000380445 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 SLC26A9Q7LBE3 791 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 PDIK1LQ8N165 341 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 PYROXD1Q8WU10 500 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 HSFY1Q96LI6 401 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 EURLQ9NYK6 297 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 NKIRAS1Q9NYS0 192 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 FETUBQ9UGM5 382 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 SLC24A2Q9UI40 661 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 APOL1O14791 398 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 FAM163BP0C2L3 166 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 ATP2A2P16615 1042 aaKnown RBP13.16□□□□□ -0.3
VPS16-202ENST00000380445 INHBEP58166 350 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 HIC1Q14526 733 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 CCL14Q16627 93 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 FAM71DQ8N9W8 422 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 ATP11CQ8NB49 1132 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms