RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PRR11Q96HE9 360 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 CNOT6LQ96LI5 555 aaKnown RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ERGIC2Q96RQ1 377 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PSD2Q9BQI7 771 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 OSBPL8Q9BZF1 889 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 CNNM1Q9NRU3 951 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 RIMKLBQ9ULI2 386 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ARHGAP26Q9UNA1 814 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PP2D1A8MPX8 630 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 POTECB2RU33 542 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 TK2O00142 265 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 HOXC11O43248 304 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 GSTM1P09488 218 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 GFAPP14136 432 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PDE6AP16499 860 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 HAAOP46952 286 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 CACNB3P54284 484 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF200P98182 395 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 SPARCL1Q14515 664 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ANO4Q32M45 955 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 DALRD3Q5D0E6 543 aaKnown RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 RABGAP1LQ5R372 815 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 OTOAQ7RTW8 1153 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 TSPAN14Q8NG11 270 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ADAMTS16Q8TE57 1224 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PACSIN1Q9BY11 444 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 FBXO6Q9NRD1 293 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ANKMY1Q9P2S6 941 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 AP4B1Q9Y6B7 739 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 TMX2-CTNND1H3BSU7 103 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 CYP26A1O43174 497 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 SCO2O43819 266 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 GPC4O75487 556 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 STAT3P40763 770 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ASTE1Q2TB18 679 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 RNF111Q6ZNA4 994 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 FRA10AC1Q70Z53 315 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 UTS2BQ765I0 119 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 JAMLQ86YT9 394 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 TMPRSS6Q8IU80 811 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 FANCBQ8NB91 859 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF75CPQ92670 426 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 C12orf43Q96C57 262 aaKnown RBP9.73□□□□□ -0.85
PTPRA-204ENST00000380393 SNTG2Q9NY99 539 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 INPP5FQ9Y2H2 1132 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 NR2E1Q9Y466 385 aa9.73□□□□□ -0.85
PTPRA-204ENST00000380393 PVALEFA0A1B0GWK0 134 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 SSU72P8A0A1W2PR75 194 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 SMCO2A6NFE2 343 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 TM7SF2O76062 418 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 KRT13P13646 458 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 BMPR1AP36894 532 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 STX1BP61266 288 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 RRP1BQ14684 758 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PERM1Q5SV97 790 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 CLVS2Q5SYC1 327 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PRUNE1Q86TP1 453 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 ANKRD35Q8N283 1001 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PPM1KQ8N3J5 372 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 VGLL2Q8N8G2 317 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 HIPK4Q8NE63 616 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 RBM15Q96T37 977 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 HOXD1Q9GZZ0 328 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 TRIT1Q9H3H1 467 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 EPS15L1Q9UBC2 864 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 CORINQ9Y5Q5 1042 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 AFDNP55196 1824 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 ARHGAP42A6NI28 874 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PLSCR1O15162 318 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 CRTAMO95727 393 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PAHP00439 452 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 FAM228BP0C875 321 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 MCAMP43121 646 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PHKA1P46020 1223 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 SLC9A3P48764 834 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 TAGLNQ01995 201 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 OVGP1Q12889 678 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 BNIP3Q12983 259 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 OXA1LQ15070 435 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PDK1Q15118 436 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 LSM12Q3MHD2 195 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 PLEKHG4Q58EX7 1191 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 CCDC84Q86UT8 332 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 DNAAF5Q86Y56 855 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF654Q8IZM8 581 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 SLC15A4Q8N697 577 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 TERB1Q8NA31 727 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 GSTCDQ8NEC7 633 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 DCUN1D1Q96GG9 259 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 NOL6Q9H6R4 1146 aaKnown RBP9.72□□□□□ -0.85
PTPRA-204ENST00000380393 TCF7L2Q9NQB0 619 aa9.72□□□□□ -0.85
PTPRA-204ENST00000380393 ARPP21Q9UBL0 812 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms