RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 NENFQ9UMX5 172 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 FARP1Q9Y4F1 1045 aaPredicted RBP5.89□□□□□ -1.47
DDX58-201ENST00000379868 PCDHA11Q9Y5I1 949 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 CTAGE15A4D2H0 777 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 LINC01553A4QN01 128 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 RFPL2O75678 378 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 FBXO21O94952 628 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 GJB6O95452 261 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 CTAGE8P0CG41 777 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 NEFHP12036 1026 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 TYMPP19971 482 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 GPD1P21695 349 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 ITGB8P26012 769 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 COG7P83436 770 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 CKAP4Q07065 602 aaKnown RBP5.89□□□□□ -1.47
DDX58-201ENST00000379868 CNGA2Q16280 664 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 UPP1Q16831 310 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 C10orf76Q5T2E6 689 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 VSTM1Q6UX27 236 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 PPP1R21Q6ZMI0 780 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 NOP9Q86U38 636 aaKnown RBP5.89□□□□□ -1.47
DDX58-201ENST00000379868 CTAGE6Q86UF2 777 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 CTAGE4Q8IX94 777 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 ANKRD52Q8NB46 1076 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 PABPC5Q96DU9 382 aaKnown RBP5.89□□□□□ -1.47
DDX58-201ENST00000379868 TTYH3Q9C0H2 523 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 GOLPH3Q9H4A6 298 aa5.89□□□□□ -1.47
DDX58-201ENST00000379868 PTPRJQ12913 1337 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 GOLGA8CPA6NN73 597 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 F5H423 210 aaPredicted RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 DFFAO00273 331 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 MDM4O15151 490 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ABCB7O75027 752 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 CNPP09543 421 aaKnown RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 MYBL1P10243 752 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PTPN2P17706 415 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ADAM17P78536 824 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 MIIPQ5JXC2 388 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 DEFB106AQ8N104 65 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ZNF461Q8TAF7 563 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PLEKHO2Q8TD55 490 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 RXFP2Q8WXD0 754 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 RFFLQ8WZ73 363 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 NDRG1Q92597 394 aaKnown RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 FBXL18Q96ME1 805 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 KREMEN1Q96MU8 473 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 NCAPGQ9BPX3 1015 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 B3GNT5Q9BYG0 378 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PBX4Q9BYU1 374 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 HAPLN2Q9GZV7 340 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ZMYND15Q9H091 742 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 THAP2Q9H0W7 228 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 HMGXB4Q9UGU5 601 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 AFF4Q9UHB7 1163 aaKnown RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 SIX4Q9UIU6 781 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PACSIN2Q9UNF0 486 aaPredicted RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 TFR2Q9UP52 801 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 YIPF1Q9Y548 306 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ZDBF2Q9HCK1 2354 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 EVPLQ92817 2033 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PRR23AA6NEV1 266 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 F5H5T6 163 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 MAP3K6O95382 1288 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 KRT7P08729 469 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 RARGP13631 454 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 CDC25CP30307 473 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 SLC5A3P53794 718 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 EPHB4P54760 987 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 TBX4P57082 545 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 AMPD2Q01433 879 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 KCNMA1Q12791 1236 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 CALCOCO2Q13137 446 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PDCLQ13371 301 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ZNF211Q13398 564 aaPredicted RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 KCNT1Q5JUK3 1230 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ACAD10Q6JQN1 1059 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ZNF571Q7Z3V5 609 aaPredicted RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 CARNMT1Q8N4J0 409 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ATP6V0D2Q8N8Y2 350 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 EPS8L1Q8TE68 723 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 FAM172AQ8WUF8 416 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 SHC3Q92529 594 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 CASP10Q92851 521 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 BTBD6Q96KE9 485 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 SP110Q9HB58 689 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 PLK2Q9NYY3 685 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 COLQQ9Y215 455 aaPredicted RBP5.88□□□□□ -1.47
DDX58-201ENST00000379868 ITIH6Q6UXX5 1313 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 SSU72P8A0A1W2PR75 194 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 TBC1D3BA6NDS4 549 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 KRIT1O00522 736 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 MCF2LO15068 1137 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 TBC1D4O60343 1298 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 HSF2BPO75031 334 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 CILPO75339 1184 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 PALMO75781 387 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 VNN1O95497 513 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 SLC2A3P11169 496 aa5.88□□□□□ -1.47
DDX58-201ENST00000379868 RWDD2BP57060 319 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms