RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PCDH9Q9HC56 1237 aa15.53■□□□□ 0.08
PRNP-201ENST00000379440 NGRNQ9NPE2 291 aaKnown RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 TBK1Q9UHD2 729 aa15.53■□□□□ 0.08
PRNP-201ENST00000379440 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 TFE3P19532 575 aaPredicted RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 IGFBP6P24592 240 aaPredicted RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 CRYBB1P53674 252 aaPredicted RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 SLC6A3Q01959 620 aa15.53■□□□□ 0.08
PRNP-201ENST00000379440 CYP4X1Q8N118 509 aa15.53■□□□□ 0.08
PRNP-201ENST00000379440 SERPINB12Q96P63 405 aa15.53■□□□□ 0.08
PRNP-201ENST00000379440 XPO6Q96QU8 1125 aaKnown RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 APBA2Q99767 749 aa15.53■□□□□ 0.08
PRNP-201ENST00000379440 SUDS3Q9H7L9 328 aaPredicted RBP15.53■□□□□ 0.08
PRNP-201ENST00000379440 PRPSAP2O60256 369 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 BANF1O75531 89 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 C6orf222P0C671 652 aaPredicted RBP15.52■□□□□ 0.08
PRNP-201ENST00000379440 QPCTQ16769 361 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 ERMARDQ5T6L9 678 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 UNC93AQ86WB7 457 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 RELL1Q8IUW5 271 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 TTC13Q8NBP0 860 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 TRPV1Q8NER1 839 aa15.52■□□□□ 0.08
PRNP-201ENST00000379440 ARHGEF2Q92974 986 aaKnown RBP15.52■□□□□ 0.08
PRNP-201ENST00000379440 APOC4-APOC2K7ER74 178 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 ENDOD1O94919 500 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 CD4P01730 458 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 APOC2P02655 101 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 EIF3EP60228 445 aaKnown RBP15.52■□□□□ 0.07
PRNP-201ENST00000379440 DPYSL3Q14195 570 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 CCDC142Q17RM4 750 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 TWF2Q6IBS0 349 aaKnown RBP15.52■□□□□ 0.07
PRNP-201ENST00000379440 RGMBQ6NW40 437 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 CAPN12Q6ZSI9 719 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 SAPCD2Q86UD0 394 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 FAM172AQ8WUF8 416 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 RSAD2Q8WXG1 361 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 MAK16Q9BXY0 300 aaKnown RBP15.52■□□□□ 0.07
PRNP-201ENST00000379440 RSAD1Q9HA92 442 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 CACNG4Q9UBN1 327 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.07
PRNP-201ENST00000379440 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 MEIS3P2A8K0S8 358 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 LCP1P13796 627 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 RPL22P35268 128 aaKnown RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 MORF4L2Q15014 288 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 ANKRD22Q5VYY1 191 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 ARHGAP17Q68EM7 881 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 ZC3H18Q86VM9 953 aaKnown RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 FAM228AQ86W67 206 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 FAM71DQ8N9W8 422 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 SPATA18Q8TC71 538 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 ATXN2LQ8WWM7 1075 aaKnown RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 PRCCQ92733 491 aaPredicted RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 ZFP42Q96MM3 310 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 KATNAL1Q9BW62 490 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 STMN4Q9H169 189 aaPredicted RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 SPATS2LQ9NUQ6 558 aaKnown RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 Q9Y3F1 56 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 IGHA2P01877 340 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 RBP3P10745 1247 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 NEFHP12036 1026 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 KCNE1P15382 129 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 SDC4P31431 198 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 CTCFP49711 727 aaPredicted RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 CRHR2Q13324 411 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 MTM1Q13496 603 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 CA9Q16790 459 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 C1orf228Q6PIY5 440 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 SNX25Q9H3E2 840 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 SETSIPP0DME0 302 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 IL4RP24394 825 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 TAF6P49848 677 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 ATXN1P54253 815 aaKnown RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 ZBED8Q8IZ13 594 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 CRYBG2Q8N1P7 616 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 APPL2Q8NEU8 664 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 SLC2A14Q8TDB8 520 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 CPT1BQ92523 772 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 CENPTQ96BT3 561 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 ADAM33Q9BZ11 813 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 MAGEB5Q9BZ81 275 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 FOXP3Q9BZS1 431 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 INTS9Q9NV88 658 aaKnown RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 NAALADL1Q9UQQ1 740 aa15.51■□□□□ 0.07
PRNP-201ENST00000379440 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
PRNP-201ENST00000379440 TCRBV7S3A2A0A539 114 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 ATP2C2O75185 946 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 AKR1A1P14550 325 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 HOXC8P31273 242 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 KRT81Q14533 505 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 GNASQ5JWF2 1037 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 CXCL17Q6UXB2 119 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 TAOK1Q7L7X3 1001 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 ANKMY2Q8IV38 441 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 NME8Q8N427 588 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 ANKRD52Q8NB46 1076 aa15.5■□□□□ 0.07
PRNP-201ENST00000379440 ZNF560Q96MR9 790 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms