RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 SERPINB7O75635 380 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 RFX1P22670 979 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 TTC39BQ5VTQ0 682 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ZFP1Q6P2D0 407 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 UGT2A3Q6UWM9 527 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ZNF713Q8N859 430 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 FAM47BQ8NA70 645 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 STARD8Q92502 1023 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ACSF2Q96CM8 615 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 EPB41L1Q9H4G0 881 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 CLK4Q9HAZ1 481 aaKnown RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 PLK2Q9NYY3 685 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 DNPEPQ9ULA0 475 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 GRID1Q9ULK0 1009 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 SPATA31D1Q6ZQQ2 1576 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 H3BNX3 289 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ZC3H11AO75152 810 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■■■■ 37.4
USP6NL-202ENST00000379237 EIF2S1P05198 315 aaKnown RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 SAT1P21673 171 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 RPL10AP62906 217 aaKnown RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 WASHC5Q12768 1159 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 NME3Q13232 169 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 PPP2R5DQ14738 602 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ANKDD1AQ495B1 522 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 DACH2Q96NX9 599 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 SQORQ9Y6N5 450 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 E2F8A0AVK6 867 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 SPAG6O75602 509 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 COL6A2P12110 1019 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 RXRBP28702 533 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 PHKA2P46019 1235 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 VAMP7P51809 220 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 SETD3Q86TU7 594 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ADCK1Q86TW2 530 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 PPP1R10Q96QC0 940 aaKnown RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 MTG1Q9BT17 334 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-202ENST00000379237 TPK1Q9H3S4 243 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 TRIM39Q9HCM9 518 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 PNPLA3Q9NST1 481 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 ERCC6L2Q5T890 1561 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 GOLGA8QA0A0J9YX86 632 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 GOLGA8OA6NCC3 632 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 UBAP1LF5GYI3 381 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 GOLGA8NF8WBI6 632 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 THRAP10827 490 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 STMN1P16949 149 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 TPTE2Q6XPS3 522 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 Q6ZNX1 250 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 POLNQ7Z5Q5 900 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 SLC47A2Q86VL8 602 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 PPIL6Q8IXY8 311 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 TMIGD2Q96BF3 282 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 CXorf21Q9HAI6 301 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 GPRC5DQ9NZD1 345 aa11.34□□□□□ -0.59
USP6NL-202ENST00000379237 GTPBP10A4D1E9 387 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 SAC3D1A6NKF1 404 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 M0R3G1 203 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 SLC16A2P36021 539 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 ETFBP38117 255 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 NFX1Q12986 1120 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CBWD6Q4V339 395 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 TNFAIP8L3Q5GJ75 292 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CBWD3Q5JTY5 395 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CBWD5Q5RIA9 395 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 ALLCQ8N6M5 410 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 ADCY4Q8NFM4 1077 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 VPS45Q9NRW7 570 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CAB39Q9Y376 341 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 GPC4O75487 556 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CPA3P15088 417 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 KCNA1Q09470 495 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 ADGRA1Q86SQ6 560 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 DENND1AQ8TEH3 1009 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 SLC35B4Q969S0 331 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 C12orf43Q96C57 262 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CEP295NLQ96MC4 621 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 RNF38Q9H0F5 515 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 MAD2L2Q9UI95 211 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L15C9J2P7 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L13C9JLJ4 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L11C9JVI0 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L18D6R9N7 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L22D6RA61 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L17D6RBQ6 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L19D6RCP7 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L20D6RJB6 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 DDX39AO00148 427 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 STIP1P31948 543 aaKnown RBP11.33□□□□□ -0.6
USP6NL-202ENST00000379237 USP17L24Q0WX57 530 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 RALGDSQ12967 914 aa11.33□□□□□ -0.6
USP6NL-202ENST00000379237 CYP1B1Q16678 543 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms