RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CD101Q93033 1021 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 JAKMIP2Q96AA8 810 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 CYFIP2Q96F07 1278 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 SMOQ99835 787 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 GMIPQ9P107 970 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 CFAP97Q9P2B7 532 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 WDR87Q6ZQQ6 2873 aa26.1■■□□□ 1.77
TNFRSF4-201ENST00000379236 TRIM49BA6NDI0 452 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 TNFRSF10BO14763 440 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 LILRB5O75023 590 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 CILPO75339 1184 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 GALK1P51570 392 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 FILIP1Q7Z7B0 1213 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 ELOA2Q8IYF1 753 aaPredicted RBP26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 CHFRQ96EP1 664 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 FAXDC2Q96IV6 333 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 TWNKQ96RR1 684 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 HNRNPABQ99729 332 aaKnown RBP26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 LINC00597Q9H2U6 94 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 CSNK1G1Q9HCP0 422 aa26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 ARMCX3Q9UH62 379 aaPredicted RBP26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 CIZ1Q9ULV3 898 aaPredicted RBP26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 SMG5Q9UPR3 1016 aaKnown RBP26.09■■□□□ 1.77
TNFRSF4-201ENST00000379236 EGFP01133 1207 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 TDGF1P13385 188 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 FBXO43Q4G163 708 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 ZNF394Q53GI3 561 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 KIAA1958Q8N8K9 716 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 SUMF1Q8NBK3 374 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 ZMIZ2Q8NF64 920 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 SEMA4DQ92854 862 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 DHTKD1Q96HY7 919 aaPredicted RBP26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 EPC1Q9H2F5 836 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 TLR8Q9NR97 1041 aaKnown RBP26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 MAN1B1Q9UKM7 699 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 SLC8A2Q9UPR5 921 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 SH3BP1Q9Y3L3 701 aa26.08■■□□□ 1.77
TNFRSF4-201ENST00000379236 FRYLO94915 3013 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 MYOFQ9NZM1 2061 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 COCHO43405 550 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 RNF40O75150 1001 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 BEST1O76090 585 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 PAPSS2O95340 614 aaPredicted RBP26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 TUBP50607 506 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 PMS1P54277 932 aaKnown RBP26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 ZXDBP98169 803 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 CCDC40Q4G0X9 1142 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 HEATR6Q6AI08 1181 aaKnown RBP26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 KLHL10Q6JEL2 608 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 CLEC20AQ6ZU45 233 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 HEXIM2Q96MH2 286 aaKnown RBP26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 IL37Q9NZH6 218 aa26.07■■□□□ 1.76
TNFRSF4-201ENST00000379236 CHURC1-FNTBB4DL54 471 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 FNTBP49356 437 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 MCCD1P59942 119 aaPredicted RBP26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 SNX30Q5VWJ9 437 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 PRR23BQ6ZRT6 265 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 LONP2Q86WA8 852 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 ZC3H3Q8IXZ2 948 aaKnown RBP26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 CCDC26Q8TAB7 109 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 CCSER2Q9H7U1 834 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 METTL14Q9HCE5 456 aaKnown RBP26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 CISHQ9NSE2 258 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 TBC1D14Q9P2M4 693 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 GMEB2Q9UKD1 530 aa26.06■■□□□ 1.76
TNFRSF4-201ENST00000379236 SCAMP3O14828 347 aaKnown RBP26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 ACO1P21399 889 aaKnown RBP26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 CBWD6Q4V339 395 aa26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 CBWD3Q5JTY5 395 aa26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 CBWD5Q5RIA9 395 aa26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 KIAA2013Q8IYS2 634 aa26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 PNPLA8Q9NP80 782 aa26.05■■□□□ 1.76
TNFRSF4-201ENST00000379236 E2F8A0AVK6 867 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 BICDL2A1A5D9 508 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 FAM92AA1XBS5 289 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 K7ESF4 209 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 GADD45BO75293 160 aaPredicted RBP26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 ADH1CP00326 375 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 YWHAEP62258 255 aaKnown RBP26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 GOLGA8FQ08AF8 430 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 GOLGA8DPQ0D2H9 430 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 PPP1R26Q5T8A7 1209 aaPredicted RBP26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 WHAMMQ8TF30 809 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 TMEM176AQ96HP8 235 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 CEP63Q96MT8 703 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 FAM124BQ9H5Z6 455 aaPredicted RBP26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 FBRSL1Q9HCM7 1045 aaKnown RBP26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 RALGAPA1Q6GYQ0 2036 aa26.04■■□□□ 1.76
TNFRSF4-201ENST00000379236 ZNF292O60281 2723 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 TLR5O60602 858 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 CYP17A1P05093 508 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 ZDHHC11BP0C7U3 371 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 IRF1P10914 325 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 CNR2P34972 360 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 SLC8A3P57103 927 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 NAIF1Q69YI7 327 aaPredicted RBP26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 DCLK2Q8N568 766 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 RPLP0P6Q8NHW5 317 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 ACDQ96AP0 544 aa26.03■■□□□ 1.76
TNFRSF4-201ENST00000379236 DUSP16Q9BY84 665 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms