RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 FERMT1Q9BQL6 677 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 GPR88Q9GZN0 384 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 FGFR1OP2Q9NVK5 253 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 SLC17A6Q9P2U8 582 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 FEZ2Q9UHY8 353 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 NAALADL1Q9UQQ1 740 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 GTPBP10A4D1E9 387 aaKnown RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 TCP11X1B4DZS4 312 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 CCL22O00626 93 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 FAM200BP0CF97 657 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 ATP2A2P16615 1042 aaKnown RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 SLC12A1Q13621 1099 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 CA9Q16790 459 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 COBLL1Q53SF7 1204 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 TTMPQ5BVD1 217 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 ZNF697Q5TEC3 545 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 ZPBP2Q6X784 338 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 OR6P1Q8NGX9 317 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 LMO3Q8TAP4 145 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 WHAMMQ8TF30 809 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 GRK7Q8WTQ7 553 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 TRIB2Q92519 343 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 TIPINQ9BVW5 301 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 AGO3Q9H9G7 860 aaKnown RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 RNF186Q9NXI6 227 aa8.46□□□□□ -1.06
CKAP2-203ENST00000378037 MAP3K20Q9NYL2 800 aaKnown RBP8.46□□□□□ -1.06
CKAP2-203ENST00000378037 ATG2BQ96BY7 2078 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 H0Y3Z8 333 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TUBBP07437 444 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 GOT1P17174 413 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CYP2F1P24903 491 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 HNRNPH3P31942 346 aaKnown RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 GMPRP36959 345 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 AVPR1AP37288 418 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 PRKCIP41743 596 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 GDF10P55107 478 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 MAXP61244 160 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CDK17Q00537 523 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SEMG2Q02383 582 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 POU5F1BQ06416 359 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SOX4Q06945 474 aaPredicted RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CCDC6Q16204 474 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 POM121L1PQ3SYA9 428 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 NXNQ6DKJ4 435 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TAPT1Q6NXT6 567 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 ENOSF1Q7L5Y1 443 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 RNF180Q86T96 592 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 MMGT1Q8N4V1 131 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 ZC3H15Q8WU90 426 aaKnown RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 MPP6Q9NZW5 540 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 LCMT1Q9UIC8 334 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SIX4Q9UIU6 781 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CPSF3Q9UKF6 684 aaKnown RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 BARX2Q9UMQ3 279 aaPredicted RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 UBQLN1Q9UMX0 589 aaKnown RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 ZDBF2Q9HCK1 2354 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TBKBP1A7MCY6 615 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 ACRP10323 421 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 IL1R2P27930 398 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CPA2P48052 419 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 GLRBP48167 497 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TPI1P60174 286 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TSPY1Q01534 308 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 GBE1Q04446 702 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 DMTNQ08495 405 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TBC1D1Q86TI0 1168 aaPredicted RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SAPCD2Q86UD0 394 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 UNC45BQ8IWX7 931 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CNPY4Q8N129 248 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SPATA6LQ8N4H0 392 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 LRRC57Q8N9N7 239 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 PPTC7Q8NI37 304 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SNF8Q96H20 258 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 ATP6V1G3Q96LB4 118 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 SYT15Q9BQS2 421 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 CPSF2Q9P2I0 782 aaKnown RBP8.45□□□□□ -1.06
CKAP2-203ENST00000378037 FAM186AA6NE01 2351 aa8.45□□□□□ -1.06
CKAP2-203ENST00000378037 TMEM120BA0PK00 339 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 ASAP2O43150 1006 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 FAM155BO75949 473 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 IRAK1P51617 712 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 MTMR3Q13615 1198 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 C10orf120Q5SQS8 335 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 HFE2Q6ZVN8 426 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 CIR1Q86X95 450 aaPredicted RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 TP53INP2Q8IXH6 220 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 BORCS6Q96GS4 357 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 SMC6Q96SB8 1091 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 C16orf70Q9BSU1 422 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 DNAI2Q9GZS0 605 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 AP4E1Q9UPM8 1137 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 NFASCO94856 1347 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 TRPM7Q96QT4 1865 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 SYF2O95926 243 aaKnown RBP8.44□□□□□ -1.06
CKAP2-203ENST00000378037 JCHAINP01591 159 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 MT-ND3P03897 115 aa8.44□□□□□ -1.06
CKAP2-203ENST00000378037 DARSP14868 501 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms