RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 BEX3Q00994 111 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 ERMARDQ5T6L9 678 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 ETNPPLQ8TBG4 499 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 HSD17B14Q9BPX1 270 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 EMILIN2Q9BXX0 1053 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 RNF208Q9H0X6 261 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 DRG1Q9Y295 367 aaKnown RBP20.39■□□□□ 0.85
PCDH8-202ENST00000377942 LOC102724159A0A0B4J2E5 919 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 KCNA1Q09470 495 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 PWP2Q15269 919 aaKnown RBP20.39■□□□□ 0.85
PCDH8-202ENST00000377942 ANKS3Q6ZW76 656 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 GPATCH2LQ9NWQ4 482 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 SCOCQ9UIL1 159 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 SLC25A13Q9UJS0 675 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 CNTNAP2Q9UHC6 1331 aa20.39■□□□□ 0.85
PCDH8-202ENST00000377942 RECQL4O94761 1208 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 RHOCP08134 193 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 RARGP13631 454 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 FAM83EQ2M2I3 478 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 DNAJC19Q96DA6 116 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 RHOBTB1O94844 696 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 NRBF2Q96F24 287 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 CYP4F11Q9HBI6 524 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 CD274Q9NZQ7 290 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 COL14A1Q05707 1796 aaKnown RBP20.38■□□□□ 0.85
PCDH8-202ENST00000377942 CES2O00748 559 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 TUFMP49411 452 aaKnown RBP20.38■□□□□ 0.85
PCDH8-202ENST00000377942 FAM171A1Q5VUB5 890 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 SH2D3CQ8N5H7 860 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 TMEM161BQ8NDZ6 487 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 ATG4AQ8WYN0 398 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 ITGB5P18084 799 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 CHRM3P20309 590 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 CASKIN2Q8WXE0 1202 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 SERPINB11Q96P15 392 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 SLC4A7Q9Y6M7 1214 aa20.38■□□□□ 0.85
PCDH8-202ENST00000377942 TMEM120BA0PK00 339 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 ANGPT2O15123 496 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 MICAL2O94851 1124 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 COBLL1Q53SF7 1204 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 DENND5BQ6ZUT9 1274 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 LZTR1Q8N653 840 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 UROC1Q96N76 676 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 ADAM2Q99965 735 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 CHST12Q9NRB3 414 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 CDY2AQ9Y6F7 541 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 CDY1Q9Y6F8 540 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 PRPF4O43172 522 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDH8-202ENST00000377942 TIMM44O43615 452 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 TTC30BQ8N4P2 665 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 OR2W6PQ8NHA6 318 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 COPS5Q92905 334 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 FAM161BQ96MY7 647 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 PRDM16Q9HAZ2 1276 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 SLC39A10Q9ULF5 831 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 TBX2Q13207 712 aaPredicted RBP20.37■□□□□ 0.85
PCDH8-202ENST00000377942 TEX12Q9BXU0 123 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 UBE2OQ9C0C9 1292 aaKnown RBP20.37■□□□□ 0.85
PCDH8-202ENST00000377942 ECT2Q9H8V3 914 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 USP15Q9Y4E8 981 aaPredicted RBP20.37■□□□□ 0.85
PCDH8-202ENST00000377942 FUT2Q10981 343 aa20.37■□□□□ 0.85
PCDH8-202ENST00000377942 TIMM13Q9Y5L4 95 aaPredicted RBP20.37■□□□□ 0.85
PCDH8-202ENST00000377942 TRIM49D1C9J1S8 452 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 EIF3HO15372 352 aaKnown RBP eCLIP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 SMIM10L2AP0DMW4 78 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 SMIM10L2BP0DMW5 78 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 EEF1B2P24534 225 aaKnown RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 AP2B1P63010 937 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 AGR3Q8TD06 166 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 DDI1Q8WTU0 396 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 SUPT3HB4E1H0 165 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 SUPT3HO75486 399 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 HSD17B3P37058 310 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 MAGEA9P43362 315 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 MKRN4PQ13434 485 aaPredicted RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 ANKRD23Q86SG2 305 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 ANKRD7Q92527 254 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 TTLL13PA6NNM8 815 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 SOAT2O75908 522 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 CYP2F1P24903 491 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 MRPS6P82932 125 aaKnown RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 ADIGQ0VDE8 80 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 ILF2Q12905 390 aaKnown RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 MEA1Q16626 185 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 FAXCQ5TGI0 409 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 UXTQ9UBK9 157 aaPredicted RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 HEATR9A2RTY3 570 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 PJA2O43164 708 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 KLRC4O43908 158 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 KLHL2O95198 593 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 YWHAQP27348 245 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 PRKCIP41743 596 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 HYIQ5T013 277 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 CXCL17Q6UXB2 119 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 ACTL9Q8TC94 416 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 BLOC1S5Q8TDH9 187 aa20.36■□□□□ 0.85
PCDH8-202ENST00000377942 INPP4AQ96PE3 977 aaPredicted RBP20.36■□□□□ 0.85
PCDH8-202ENST00000377942 ADAM33Q9BZ11 813 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms