RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CFAP97Q9P2B7 532 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 ANAPC1Q9H1A4 1944 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 KIF26AQ9ULI4 1882 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 OTOL1A6NHN0 477 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 CYP26A1O43174 497 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 COCHO43405 550 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 NFATC1O95644 943 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 IRF1P10914 325 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 CHRNB1P11230 501 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 TBXAS1P24557 533 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 NBL1P41271 181 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 RAD23BP54727 409 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 MLLT6P55198 1093 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 SLC8A3P57103 927 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 SLC7A9P82251 487 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 FZD5Q13467 585 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 PPP2R5DQ14738 602 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 GOLGA7BQ2TAP0 167 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 Q6ZS52 159 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 SLC4A11Q8NBS3 891 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 NKD2Q969F2 451 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 DUSP16Q9BY84 665 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 NUP62CLQ9H1M0 184 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 CCSER2Q9H7U1 834 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 CSNK1G1Q9HCP0 422 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 TLR8Q9NR97 1041 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 COQ4Q9Y3A0 265 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 SH3BP1Q9Y3L3 701 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 PCDHB4Q9Y5E5 795 aa12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMARCE1-203ENST00000377808 TLR5O60602 858 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 AFPP02771 609 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 GJA4P35212 333 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 CCR3P51677 355 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 MCCD1P59942 119 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 ZXDBP98169 803 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 NR1H3Q13133 447 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 EML3Q32P44 896 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 DGKKQ5KSL6 1271 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 RRAGAQ7L523 313 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 MAML2Q8IZL2 1156 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 CNOT6LQ96LI5 555 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 GBP4Q96PP9 640 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 LINC00597Q9H2U6 94 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 HESX1Q9UBX0 185 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 NAGPAQ9UK23 515 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 FBXO4Q9UKT5 387 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 MYO16Q9Y6X6 1858 aa12.21□□□□□ -0.45
SMARCE1-203ENST00000377808 HELZP42694 1942 aaKnown RBP12.21□□□□□ -0.46
SMARCE1-203ENST00000377808 PATJQ8NI35 1801 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 A0A1W2PQH9 124 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 HHLA1C9JL84 531 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 SLC9A3R1O14745 358 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 OLFM2O95897 454 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 TCF3P15923 654 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 SATB1Q01826 763 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 SGO2Q562F6 1265 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 NAIF1Q69YI7 327 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 TMEM270Q6UE05 265 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 ASCL5Q7RTU5 278 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 TRIM59Q8IWR1 403 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 ATRIPQ8WXE1 791 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 KAT5Q92993 513 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 CHFRQ96EP1 664 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 P2RY13Q9BPV8 354 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 HINFPQ9BQA5 517 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 IER2Q9BTL4 223 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 INTS2Q9H0H0 1204 aaKnown RBP12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 NUDT5Q9UKK9 219 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 TSPAN16Q9UKR8 245 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 F5P12259 2224 aa12.2□□□□□ -0.46
SMARCE1-203ENST00000377808 PRR23AA6NEV1 266 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 MDM4O15151 490 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 P4HA2O15460 535 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 TBX18O95935 607 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 EGFP01133 1207 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 ZDHHC11BP0C7U3 371 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 RARGP13631 454 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 MTIF2P46199 727 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 CXCL12P48061 93 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 PGFP49763 221 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 TUBP50607 506 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 GALK1P51570 392 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 KIF11P52732 1056 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 BCAT1P54687 386 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 GOLGA8FQ08AF8 430 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 GOLGA8DPQ0D2H9 430 aa12.19□□□□□ -0.46
SMARCE1-203ENST00000377808 C10orf120Q5SQS8 335 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms