RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF280DQ6N043 979 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 STKLD1Q8NE28 680 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 CFAP61Q8NHU2 1237 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 EPS8L3Q8TE67 593 aaKnown RBP15.08■□□□□ 0
TCOF1-202ENST00000377797 SCG3Q8WXD2 468 aaKnown RBP15.08■□□□□ 0
TCOF1-202ENST00000377797 LPPQ93052 612 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 SIX2Q9NPC8 291 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 CCDC195A0A1B0GUA6 201 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 EIF3HO15372 352 aaKnown RBP eCLIP15.08■□□□□ 05e-6■■■□□ 14.9
TCOF1-202ENST00000377797 CYP2F1P24903 491 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 POU5F1BQ06416 359 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 C15orf59Q2T9L4 293 aaPredicted RBP15.08■□□□□ 0
TCOF1-202ENST00000377797 IL31Q6EBC2 164 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 ARHGAP18Q8N392 663 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 CCT8L2Q96SF2 557 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 RNF208Q9H0X6 261 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 PIDD1Q9HB75 910 aa15.08■□□□□ 0
TCOF1-202ENST00000377797 SASH3O75995 380 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 PTPN1P18031 435 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 CD52P31358 61 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 SEC24CP53992 1094 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 IPMKQ8NFU5 416 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 ADAM32Q8TC27 787 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 TACO1Q9BSH4 297 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 XAB2Q9HCS7 855 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 ZBTB24O43167 697 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 SLC2A3P11169 496 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 FECHP22830 423 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 HOXD13P35453 343 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 PTK7Q13308 1070 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 MORF4L2Q15014 288 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 ACAP1Q15027 740 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 PCSK7Q16549 785 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 MSL3Q8N5Y2 521 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 XPO6Q96QU8 1125 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 PPCSQ9HAB8 311 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 ANGPTL3Q9Y5C1 460 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 FAM47DPA6NHR8 397 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 S100BP04271 92 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 GBP7Q8N8V2 638 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 RPRD1AQ96P16 312 aaPredicted RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 EPN3Q9H201 632 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 PDZD7Q9H5P4 517 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 PCDH9Q9HC56 1237 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 ZC3H4Q9UPT8 1303 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 PDE4DIPQ5VU43 2346 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 TMEM88BA6NKF7 163 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 MSCO60682 206 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 NDUFAF2Q8N183 169 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 LRRC52Q8N7C0 313 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 C1orf127Q8N9H9 656 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 MDM1Q8TC05 714 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 SMARCD1Q96GM5 515 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 PGLYRP2Q96PD5 576 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 DDX50Q9BQ39 737 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 TRIM56Q9BRZ2 755 aaKnown RBP15.07■□□□□ 0
TCOF1-202ENST00000377797 ATP11BQ9Y2G3 1177 aa15.07■□□□□ 0
TCOF1-202ENST00000377797 CHD4Q14839 1912 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 AP3B1O00203 1094 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 MBTD1Q05BQ5 628 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 ACCSLQ4AC99 568 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 AENQ8WTP8 325 aaKnown RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 C18orf25Q96B23 403 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 SERPINB12Q96P63 405 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 ACTR5Q9H9F9 607 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 GDF3Q9NR23 364 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 TXLNGQ9NUQ3 528 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 PPARGC1AQ9UBK2 798 aaKnown RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 C22orf31O95567 290 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 IRF1P10914 325 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 NCF2P19878 526 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 BDNFP23560 247 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 PCK1P35558 622 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 HARS2P49590 506 aaKnown RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 ARHGAP1Q07960 439 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 FAM171A1Q5VUB5 890 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 DENND5BQ6ZUT9 1274 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 SGSM3Q96HU1 749 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 PPARGP37231 505 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 TSTA3Q13630 321 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 TMEM86AQ8N2M4 240 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 CCNYL1Q8N7R7 359 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 PRELID2Q8N945 189 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 FBXO36Q8NEA4 188 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 ZNF669Q96BR6 464 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 STAMBPL1Q96FJ0 436 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 ULBP1Q9BZM6 244 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 TRPV6Q9H1D0 765 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 DMAP1Q9NPF5 467 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 FAM105AQ9NUU6 356 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.06■□□□□ 0
TCOF1-202ENST00000377797 COQ4Q9Y3A0 265 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 H7C4K7 107 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 PSMD3O43242 534 aa15.06■□□□□ 0
TCOF1-202ENST00000377797 SH3BP5O60239 455 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms