RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 LRRC6Q86X45 466 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 UBA3Q8TBC4 463 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 KCNV2Q8TDN2 545 aa26.39■■□□□ 1.81
C9orf40-201ENST00000376854 HEXIM2Q96MH2 286 aaKnown RBP26.39■■□□□ 1.81
C9orf40-201ENST00000376854 A0A0G2JND7 137 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 GPR25O00155 361 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 SOCS7O14512 581 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 CNMDO75829 334 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 ENDOD1O94919 500 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 GPD1P21695 349 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 EFCAB12Q6NXP0 572 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 FAF2Q96CS3 445 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 APOPT1Q96IL0 206 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 ELP3Q9H9T3 547 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 LNPEPQ9UIQ6 1025 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 H7C0C1 242 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 HMGCRP04035 888 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 IQCF3P0C7M6 154 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 GM2AP17900 193 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 CALB2P22676 271 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 ATP5OP48047 213 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 NEK3P51956 506 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 RAB6CQ53S08 254 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 FAM47CQ5HY64 1035 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 OTUD5Q96G74 571 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 FGD4Q96M96 766 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 CNPY3Q9BT09 278 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 RAB6CQ9H0N0 254 aa26.38■■□□□ 1.81
C9orf40-201ENST00000376854 AVILO75366 819 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 DHRS4L1P0CG22 281 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 STAG3L1P0CL83 205 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 TFDP2Q14188 446 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 C1orf228Q6PIY5 440 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 CYP4V2Q6ZWL3 525 aaPredicted RBP26.37■■□□□ 1.81
C9orf40-201ENST00000376854 CLMNQ96JQ2 1002 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 SPATA33Q96N06 139 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 FAM111AQ96PZ2 611 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 CSADQ9Y600 493 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 PIK3R2O00459 728 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 HNRNPCL1O60812 293 aaKnown RBP26.37■■□□□ 1.81
C9orf40-201ENST00000376854 SPAG6O75602 509 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 PYGBP11216 843 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 VDRP11473 427 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 ETV4P43268 484 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 SLC18A2Q05940 514 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 FAM182AQ5T1J6 154 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 TRNP1Q6NT89 227 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 CHSY1Q86X52 802 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.37■■□□□ 1.81
C9orf40-201ENST00000376854 RXFP2Q8WXD0 754 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 ASCC2Q9H1I8 757 aaPredicted RBP26.37■■□□□ 1.81
C9orf40-201ENST00000376854 CYP3A43Q9HB55 503 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 TXNRD2Q9NNW7 524 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 BATF3Q9NR55 127 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 HEY2Q9UBP5 337 aa26.37■■□□□ 1.81
C9orf40-201ENST00000376854 CHADO15335 359 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 NEFHP12036 1026 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 PDGFRAP16234 1089 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 GNAZP19086 355 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 C15orf59Q2T9L4 293 aaPredicted RBP26.36■■□□□ 1.81
C9orf40-201ENST00000376854 BZW1Q7L1Q6 419 aaKnown RBP26.36■■□□□ 1.81
C9orf40-201ENST00000376854 CXorf38Q8TB03 319 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 STK32AQ8WU08 396 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 TTC17Q96AE7 1141 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 TLE6Q9H808 572 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 RAB6BQ9NRW1 208 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 C2CD4BA6NLJ0 364 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 DDNO94850 711 aaPredicted RBP26.36■■□□□ 1.81
C9orf40-201ENST00000376854 CDO1Q16878 200 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 WASHC2DQ5SRD0 308 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 SH2D5Q6ZV89 423 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 MOB2Q70IA6 237 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 COPS5Q92905 334 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 NUDCD1Q96RS6 583 aa26.36■■□□□ 1.81
C9orf40-201ENST00000376854 LRRC37A2A6NM11 1700 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 OTOFQ9HC10 1997 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 PRPSAP2O60256 369 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 ATICP31939 592 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 ARFIP2P53365 341 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 OR6B2Q6IFH4 312 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 CFAP36Q96G28 342 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 RNF157Q96PX1 679 aa26.35■■□□□ 1.81
C9orf40-201ENST00000376854 HAUS5O94927 633 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 P4HA1P13674 534 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 KRT81Q14533 505 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 PRKD1Q15139 912 aaPredicted RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 MAP1SQ66K74 1059 aaPredicted RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 PRPF39Q86UA1 669 aaKnown RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 USP29Q9HBJ7 922 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 PAK5Q9P286 719 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 KCNN4O15554 427 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 CSDE1O75534 798 aaKnown RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 GRAP2O75791 330 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 TPBGLP0DKB5 382 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 BGNP21810 368 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 FAM183BPQ6ZVS7 135 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 HPDLQ96IR7 371 aa26.34■■□□□ 1.81
C9orf40-201ENST00000376854 PIWIL1Q96J94 861 aaKnown RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 MPHOSPH6Q99547 160 aaKnown RBP26.34■■□□□ 1.81
C9orf40-201ENST00000376854 DENND2DQ9H6A0 471 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms