RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 RNASELQ05823 741 aaKnown RBP13.52□□□□□ -0.24
TRIM40-206ENST00000376724 ZDHHC24Q6UX98 284 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 RFX6Q8HWS3 928 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 UBLCP1Q8WVY7 318 aaPredicted RBP13.52□□□□□ -0.24
TRIM40-206ENST00000376724 SLCO2A1Q92959 643 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 LRRC45Q96CN5 670 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 KCNK16Q96T55 309 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 RHOBTB2Q9BYZ6 727 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 GPATCH2LQ9NWQ4 482 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 CDH9Q9ULB4 789 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 ZNF148Q9UQR1 794 aa13.52□□□□□ -0.24
TRIM40-206ENST00000376724 VGLL3A8MV65 326 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 B4GALT3O60512 393 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 PCSK1P29120 753 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 PTPN7P35236 360 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 HSD17B3P37058 310 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 ADCY8P40145 1251 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 ATXN1P54253 815 aaKnown RBP13.52□□□□□ -0.25
TRIM40-206ENST00000376724 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 MMRN1Q13201 1228 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 BFSP2Q13515 415 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
TRIM40-206ENST00000376724 ALS2CLQ60I27 953 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 SLC26A9Q7LBE3 791 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 FAM35AQ86V20 835 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 SIX6OS1Q8N1H7 587 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 MREGQ8N565 214 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 DBF4BQ8NFT6 615 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
TRIM40-206ENST00000376724 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 UROC1Q96N76 676 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 RTP3Q9BQQ7 232 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 MED4Q9NPJ6 270 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 CYLDQ9NQC7 956 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 VPS18Q9P253 973 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 ATP8A1Q9Y2Q0 1164 aa13.52□□□□□ -0.25
TRIM40-206ENST00000376724 CCL5P13501 91 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 OR1G1P47890 313 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 TKTL1P51854 596 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 CACNA2D1P54289 1103 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 PTK6Q13882 451 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 KRT81Q14533 505 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 ZC3H12AQ5D1E8 599 aaKnown RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 CYP4V2Q6ZWL3 525 aaPredicted RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 TMC3Q7Z5M5 1100 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 GOLGA6L1Q8N7Z2 621 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 MYCBPAPQ8TBZ2 947 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 FAM71BQ8TC56 605 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 TMEM209Q96SK2 561 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 SMOQ99835 787 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 FTHL17Q9BXU8 183 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 MAK16Q9BXY0 300 aaKnown RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 PAK6Q9NQU5 681 aaPredicted RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 PLAAQ9Y263 795 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 RNF40O75150 1001 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 HDAC4P56524 1084 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 FAM189BP81408 668 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 MRPS5P82675 430 aaKnown RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 GPNMBQ14956 572 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 EFHC1Q5JVL4 640 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 OVOS1Q6IE37 1185 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 SYDE1Q6ZW31 735 aaPredicted RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 IQCKQ8N0W5 287 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 DEFB106AQ8N104 65 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 MYLPFQ96A32 169 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 C10orf88Q9H8K7 445 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 TMEM30AQ9NV96 361 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 TBC1D13Q9NVG8 400 aa13.51□□□□□ -0.25
TRIM40-206ENST00000376724 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 MTRF1LQ9UGC7 380 aaKnown RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
TRIM40-206ENST00000376724 SYNJ2BP-COX16A0A087WUM0 186 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 M0QZQ0 153 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 KRT14P02533 472 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 ATF2P15336 505 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 BDNFP23560 247 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 GBP1P32455 592 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 ADCY1Q08828 1119 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
TRIM40-206ENST00000376724 DCAF6Q58WW2 860 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 OR10T2Q8NGX3 314 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 ACTL9Q8TC94 416 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 KCTD13Q8WZ19 329 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 ART4Q93070 314 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 SNF8Q96H20 258 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 SCLYQ96I15 445 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 TBCBQ99426 244 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 ACBD6Q9BR61 282 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 TMEM121Q9BTD3 319 aa13.5□□□□□ -0.25
TRIM40-206ENST00000376724 SNRNP25Q9BV90 132 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms