RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 ASAP2O43150 1006 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 CRCPO75575 148 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 SERPINB6P35237 376 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 AP3M2P53677 418 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 TSTA3Q13630 321 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-203ENST00000376619 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 ISLR2Q6UXK2 745 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 TFAP2DQ7Z6R9 452 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 DEFB106AQ8N104 65 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 LMO3Q8TAP4 145 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 TNIP3Q96KP6 325 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 HERPUD2Q9BSE4 406 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 TINF2Q9BSI4 451 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 DPEP3Q9H4B8 488 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 ARMCX1Q9P291 453 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 TLK1Q9UKI8 766 aa11.59□□□□□ -0.55
HDAC6-203ENST00000376619 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC6-203ENST00000376619 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 CXCL11O14625 94 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ERBB2P04626 1255 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 USP17L7P0C7H9 530 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 OAZ1P54368 228 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 VCPP55072 806 aaKnown RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ZNF280AP59817 542 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 CCL14Q16627 93 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 MUM1Q2TAK8 710 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 BORCS6Q96GS4 357 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 GPR88Q9GZN0 384 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 KRT82Q9NSB4 513 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 STAP1Q9ULZ2 295 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 AP4E1Q9UPM8 1137 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 N4BP2Q86UW6 1770 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 MAPK13O15264 365 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 GYG2O15488 501 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ARFIP2P53365 341 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ZNF662Q6ZS27 426 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ADGRF2Q8IZF7 708 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 PYROXD2Q8N2H3 581 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 CCHCR1Q8TD31 782 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 NSMCE1Q8WV22 266 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 PRCCQ92733 491 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ZNF669Q96BR6 464 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 RSRC1Q96IZ7 334 aaKnown RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 FSD1LQ9BXM9 530 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ELOVL4Q9GZR5 314 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ZCWPW1Q9H0M4 648 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 RSAD1Q9HA92 442 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 TMPRSS4Q9NRS4 437 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 BARX2Q9UMQ3 279 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 BUD23O43709 281 aaKnown RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 IL18RAPO95256 599 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 JCHAINP01591 159 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 LMO2P25791 158 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 HNRNPH1P31943 449 aaKnown RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 RPA3P35244 121 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 TAF6P49848 677 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 RASSF2P50749 326 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 SCNN1GP51170 649 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 TKTL1P51854 596 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 GDF10P55107 478 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 KBTBD12Q3ZCT8 623 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 AGBL2Q5U5Z8 902 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 CYP4X1Q8N118 509 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 ERLEC1Q96DZ1 483 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 SLITRK1Q96PX8 696 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 SLC40A1Q9NP59 571 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.56
HDAC6-203ENST00000376619 LRFN2Q9ULH4 789 aa11.58□□□□□ -0.56
HDAC6-203ENST00000376619 CCT8L1PA6NM43 557 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PSTPIP1O43586 416 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 ZC3H11AO75152 810 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■■■■ 36.9
HDAC6-203ENST00000376619 DGKIO75912 1065 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 CBX6O95503 412 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 VDRP11473 427 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 MMP8P22894 467 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 EIF4BP23588 611 aaKnown RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 RPL22P35268 128 aaKnown RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 SNRPFP62306 86 aaKnown RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 ANKRD22Q5VYY1 191 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 KCNT2Q6UVM3 1135 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 GPR142Q7Z601 462 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 SEPT5Q99719 369 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 HAPLN2Q9GZV7 340 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 RPS6KL1Q9Y6S9 549 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 EEF2KO00418 725 aaKnown RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 LYPLA2O95372 231 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 EDN1P05305 212 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 BGNP21810 368 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 KDELR1P24390 212 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 CYP2F1P24903 491 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 CAV1Q03135 178 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PDZD4Q76G19 769 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PPIL6Q8IXY8 311 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PIWIL1Q96J94 861 aaKnown RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 CNPY3Q9BT09 278 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms