RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 HEXIM1O94992 359 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 ITGB1P05556 798 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 KDELR1P24390 212 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 NOS2P35228 1153 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 FLT3P36888 993 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 EPHB4P54760 987 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 DR1Q01658 176 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 LMNB2Q03252 620 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 SLC25A52Q3SY17 297 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 GPR65Q8IYL9 337 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 RNF168Q8IYW5 571 aaPredicted RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 OR10T2Q8NGX3 314 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 MYLPFQ96A32 169 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 DCLK3Q9C098 648 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 DDX47Q9H0S4 455 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 DMAP1Q9NPF5 467 aaPredicted RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 TMEM39AQ9NV64 488 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 RASAL2Q9UJF2 1139 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 PLXNA3P51805 1871 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 BEST1O76090 585 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 IL1R2P27930 398 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 CYP2C18P33260 490 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 RNASE9P60153 205 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 YWHAZP63104 245 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 DUPD1Q68J44 220 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 AADACL2Q6P093 401 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 VSTM1Q6UX27 236 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 NECAB2Q7Z6G3 386 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 EMC1Q8N766 993 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 TTC13Q8NBP0 860 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 PIWIL1Q96J94 861 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 C8orf48Q96LL4 319 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 LRRC4Q9HBW1 653 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 MARCH5Q9NX47 278 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 UTP11Q9Y3A2 253 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDPN-202ENST00000376057 FAM170AA1A519 330 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 H7C4K7 107 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 TADA2AO75478 443 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 KRT1P04264 644 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 RALAP11233 206 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 OR1G1P47890 313 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 DAOAP59103 153 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 BBS12Q6ZW61 710 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 KLHL7Q8IXQ5 586 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 MREGQ8N565 214 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 DIS3LQ8TF46 1054 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 TOP1MTQ969P6 601 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 MAGOHBQ96A72 148 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 FAF2Q96CS3 445 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 SCLYQ96I15 445 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 NPY6RQ99463 290 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 ERP44Q9BS26 406 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 RC3H2Q9HBD1 1191 aaKnown RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 POPDC2Q9HBU9 364 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 IL37Q9NZH6 218 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 RCOR3Q9P2K3 495 aaPredicted RBP11.64□□□□□ -0.55
PDPN-202ENST00000376057 HSFX1Q9UBD0 423 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 DNAJB4Q9UDY4 337 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 FAN1Q9Y2M0 1017 aa11.64□□□□□ -0.55
PDPN-202ENST00000376057 VWA8A3KMH1 1905 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 CLDN5O00501 218 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 GALTP07902 379 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 TCF4P15884 667 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 LRRC26Q2I0M4 334 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 SPDYCQ5MJ68 293 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 CCDC137Q6PK04 289 aaKnown RBP11.63□□□□□ -0.55
PDPN-202ENST00000376057 HDXQ7Z353 690 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 LRRTM3Q86VH5 581 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 MAP7D3Q8IWC1 876 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 SIX6OS1Q8N1H7 587 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 ATL2Q8NHH9 583 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 FUT8Q9BYC5 575 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 AMACRQ9UHK6 382 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 NEU2Q9Y3R4 380 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 TIMM13Q9Y5L4 95 aaPredicted RBP11.63□□□□□ -0.55
PDPN-202ENST00000376057 TCRBV7S2A1N4TA0A589 114 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 PRPSAP2O60256 369 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 LCP1P13796 627 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 SLC11A1P49279 550 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 TKTL1P51854 596 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 ZNF135P52742 658 aaPredicted RBP11.63□□□□□ -0.55
PDPN-202ENST00000376057 MAP3K7CLP57077 242 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 ADIGQ0VDE8 80 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 MFSD5Q6N075 450 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 TTC27Q6P3X3 843 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 MFSD7Q6UXD7 560 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 BHLHA9Q7RTU4 235 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 RAPGEF5Q92565 580 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 NKD2Q969F2 451 aaPredicted RBP11.63□□□□□ -0.55
PDPN-202ENST00000376057 EPB41L5Q9HCM4 733 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 STAP1Q9ULZ2 295 aa11.63□□□□□ -0.55
PDPN-202ENST00000376057 TNFRSF10BO14763 440 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms