RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 IL18RAPO95256 599 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ST3GAL1Q11201 340 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 XXYLT1Q8NBI6 393 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TCEAL3Q969E4 200 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TDRKHQ9Y2W6 561 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 WDR17Q8IZU2 1322 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MED23Q9ULK4 1368 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SH3PXD2BA1X283 911 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PTGES3LE9PB15 166 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CDH4P55283 916 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 NEDD8Q15843 81 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 HMBOX1Q6NT76 420 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PEG10Q86TG7 708 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 ARMC8Q8IUR7 673 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 DEFB107AQ8IZN7 70 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SGF29Q96ES7 293 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CCSER1Q9C0I3 900 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 POLR3BQ9NW08 1133 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 TMEM161AQ9NX61 479 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 AASSQ9UDR5 926 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PSME2Q9UL46 239 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 C2CD2LO14523 706 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PRMT2P55345 433 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 DENND5AQ6IQ26 1287 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 BHLHB9Q6PI77 547 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ZNF677Q86XU0 584 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ALG13Q9NP73 1137 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 CD93Q9NPY3 652 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SLC22A1O15245 554 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 RBP1P09455 135 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MYL6P60660 151 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CYP4Z1Q86W10 505 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MED30Q96HR3 178 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 APOL6Q9BWW8 343 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MED28Q9H204 178 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 LRRC53A6NM62 1247 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PSIP1O75475 530 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 MAPK12P53778 367 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SMIM11AP58511 58 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 POLD3Q15054 466 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 TTC16Q8NEE8 873 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ASB12Q8WXK4 309 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CEP170P1Q96L14 293 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 INPP5FQ9Y2H2 1132 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TMEM114B3SHH9 223 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CRYZL1O95825 349 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 LSAMPQ13449 338 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ZNF605Q86T29 641 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 FBXW8Q8N3Y1 598 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MSANTD3Q96H12 275 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 NDUFAF4Q9P032 175 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SH3BP4Q9P0V3 963 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 FADS2P1A8MWK0 482 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SLC1A4P43007 532 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PHKA2P46019 1235 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ZSWIM7Q19AV6 140 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CNSTQ6PJW8 725 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TPTE2Q6XPS3 522 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TBC1D21Q8IYX1 336 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 AGPAT1Q99943 283 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CALN1Q9BXU9 219 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MRPL9Q9BYD2 267 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 MYLK2Q9H1R3 596 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 ZNF334Q9HCZ1 680 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 ADCY9O60503 1353 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CARMIL3Q8ND23 1372 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 SRP72O76094 671 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 PPM1FP49593 454 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 GTF2IP78347 998 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MPP5Q8N3R9 675 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TDRD9Q8NDG6 1382 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 HOPXQ9BPY8 73 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 TCF7L2Q9NQB0 619 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 STK36Q9NRP7 1315 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 RAD18Q9NS91 495 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PHF24Q9UPV7 400 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 CUX2O14529 1486 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PIK3C2GO75747 1445 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 FAM240BA0A1B0GVZ2 78 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PTCD1O75127 700 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 TSPAN19P0C672 248 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 HNF4AP41235 474 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 PYDC2Q56P42 97 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 S100A14Q9HCY8 104 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 P4HBP07237 508 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 EIF2AK2P19525 551 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 LIG4P49917 911 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 RHEBQ15382 184 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MOSPD2Q8NHP6 518 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 THUMPD3Q9BV44 507 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 WDR11Q9BZH6 1224 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 KLHL1Q9NR64 748 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 MKS1Q9NXB0 559 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 GSC2O15499 205 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 RPS17P08708 135 aaKnown RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 PLA2G4BP0C869 781 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 AQP5P55064 265 aa6.82□□□□□ -1.32
UBR4-204ENST00000375254 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.82□□□□□ -1.32
UBR4-204ENST00000375254 OR7G1Q8NGA0 311 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms