RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SCN9AQ15858 1988 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 ZNF646O15015 1829 aaPredicted RBP5.44□□□□□ -1.54
PMS1-202ENST00000374826 UTRNP46939 3433 aa5.44□□□□□ -1.54
PMS1-202ENST00000374826 MYO5AQ9Y4I1 1855 aaKnown RBP5.43□□□□□ -1.54
PMS1-202ENST00000374826 ARHGEF17Q96PE2 2063 aaPredicted RBP5.43□□□□□ -1.54
PMS1-202ENST00000374826 A0A1W2PS29 197 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 ERVV-1B6SEH8 477 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 SNUPNO95149 360 aaKnown RBP5.43□□□□□ -1.54
PMS1-202ENST00000374826 MALP21145 153 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 RECQLP46063 649 aaPredicted RBP5.43□□□□□ -1.54
PMS1-202ENST00000374826 ZNF81P51508 661 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 DSC2Q02487 901 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 BRDTQ58F21 947 aaPredicted RBP5.43□□□□□ -1.54
PMS1-202ENST00000374826 PRR5LQ6MZQ0 368 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 SLC4A10Q6U841 1118 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 CLEC4GQ6UXB4 293 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 ZNF788Q6ZQV5 615 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 CLNKQ7Z7G1 428 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 NBPF5PQ86XG9 351 aaPredicted RBP5.43□□□□□ -1.54
PMS1-202ENST00000374826 CNBD1Q8NA66 436 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 TMIEQ8NEW7 156 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 PLBD2Q8NHP8 589 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 TMEM125Q96AQ2 219 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 ZNF778Q96MU6 729 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 HEPHQ9BQS7 1158 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 BRINP2Q9C0B6 783 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 ASB6Q9NWX5 421 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 CTTNBP2NLQ9P2B4 639 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 SLC45A2Q9UMX9 530 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 NEU2Q9Y3R4 380 aa5.43□□□□□ -1.54
PMS1-202ENST00000374826 IBTKQ9P2D0 1353 aaPredicted RBP5.42□□□□□ -1.54
PMS1-202ENST00000374826 A0A0G2JLW4 131 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 PRAMEF33A0A0G2JMD5 474 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 F2RL2O00254 374 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 PRAMEF10O60809 474 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 DTNBO60941 627 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 DDX58O95786 925 aaKnown RBP5.42□□□□□ -1.54
PMS1-202ENST00000374826 DPEP1P16444 411 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 CHRNA5P30532 468 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 SNAPC2Q13487 334 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 SF3B3Q15393 1217 aaKnown RBP5.42□□□□□ -1.54
PMS1-202ENST00000374826 AKNAD1Q5T1N1 836 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 ZNF34Q8IZ26 560 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 PDPRQ8NCN5 879 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 MYD88Q99836 296 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 IMPG2Q9BZV3 1241 aa5.42□□□□□ -1.54
PMS1-202ENST00000374826 SIDT1Q9NXL6 827 aaKnown RBP5.42□□□□□ -1.54
PMS1-202ENST00000374826 VSX1Q9NZR4 365 aaPredicted RBP5.42□□□□□ -1.54
PMS1-202ENST00000374826 ECM29Q5VYK3 1845 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 RIC1Q4ADV7 1423 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 MYH7P12883 1935 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 AK9Q5TCS8 1911 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 ARAP2Q8WZ64 1704 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 CCDC195A0A1B0GUA6 201 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 PI4KAP2A4QPH2 592 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 NT5C1B-RDH14C9J2C7 533 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 TOR1BO14657 336 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 NTSR2O95665 410 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 CYP2C19P33261 490 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 FOLR3P41439 243 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 RPS7P62081 194 aaKnown RBP5.41□□□□□ -1.54
PMS1-202ENST00000374826 FPGSQ05932 587 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 PIGFQ07326 219 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 CD300EQ496F6 205 aaPredicted RBP5.41□□□□□ -1.54
PMS1-202ENST00000374826 PREPLQ4J6C6 727 aaPredicted RBP5.41□□□□□ -1.54
PMS1-202ENST00000374826 CCDC93Q567U6 631 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 HSP90AB3PQ58FF7 597 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 TMEM240Q5SV17 173 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 SUSD4Q5VX71 490 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 KSR2Q6VAB6 950 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 ZBTB46Q86UZ6 589 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 C2CD5Q86YS7 1000 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 CFAP52Q8N1V2 620 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 PI4KAP1Q8N8J0 262 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
PMS1-202ENST00000374826 C9orf106Q8NAJ2 232 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 C3orf20Q8ND61 904 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 NSUN7Q8NE18 718 aaKnown RBP5.41□□□□□ -1.54
PMS1-202ENST00000374826 GPATCH3Q96I76 525 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 UROC1Q96N76 676 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 TIMP4Q99727 224 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 CHMP4AQ9BY43 222 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 SMC4Q9NTJ3 1288 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 INTS13Q9NVM9 706 aa5.41□□□□□ -1.54
PMS1-202ENST00000374826 LRRC14BA6NHZ5 514 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 PEX1O43933 1283 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 SUN1O94901 812 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 GNAI3P08754 354 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 SRGNP10124 158 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 PDCP20941 246 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 IBSPP21815 317 aaPredicted RBP5.4□□□□□ -1.54
PMS1-202ENST00000374826 CTGFP29279 349 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 ANXA11P50995 505 aaKnown RBP5.4□□□□□ -1.54
PMS1-202ENST00000374826 FXR1P51114 621 aaKnown RBP eCLIP5.4□□□□□ -1.54
PMS1-202ENST00000374826 PROK1P58294 105 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 GPR162Q16538 588 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 PARP10Q53GL7 1025 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 KIAA0895LQ68EN5 471 aa5.4□□□□□ -1.54
PMS1-202ENST00000374826 PPP1R42Q7Z4L9 355 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms