RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 GRK4P32298 578 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 GPD2P43304 727 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 FCGRTP55899 365 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 SNX16P57768 344 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 GPX6P59796 221 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 RBP5P82980 135 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 LAMC2Q13753 1193 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 TMEM132DQ14C87 1099 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 SMTNL2Q2TAL5 461 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 CGB2Q6NT52 195 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 APBB1IPQ7Z5R6 666 aaPredicted RBP14.56□□□□□ -0.08
HMGCL-203ENST00000374490 TBC1D1Q86TI0 1168 aaPredicted RBP14.56□□□□□ -0.08
HMGCL-203ENST00000374490 MAP7D3Q8IWC1 876 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 CEP120Q8N960 986 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 ZNF398Q8TD17 642 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 USP6NLQ92738 828 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 KLHL29Q96CT2 875 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 PAIP2Q9BPZ3 127 aaKnown RBP14.56□□□□□ -0.08
HMGCL-203ENST00000374490 SMYD3Q9H7B4 428 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 CD248Q9HCU0 757 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.56□□□□□ -0.08
HMGCL-203ENST00000374490 BARX2Q9UMQ3 279 aaPredicted RBP14.56□□□□□ -0.08
HMGCL-203ENST00000374490 PHTF1Q9UMS5 762 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 USP18Q9UMW8 372 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 AGAP1Q9UPQ3 857 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 C2CD2Q9Y426 696 aa14.56□□□□□ -0.08
HMGCL-203ENST00000374490 FOXO6A8MYZ6 492 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 DPYSL4O14531 572 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 EDF1O60869 148 aaKnown RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 SPAG7O75391 227 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 SETSIPP0DME0 302 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ALADP13716 330 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 CCNB1P14635 433 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 YARSP54577 528 aaKnown RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 PDK2Q15119 407 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 NOMO1Q15155 1222 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 SEPT7Q16181 437 aaKnown RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 FAM102AQ5T9C2 384 aaPredicted RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 LCLAT1Q6UWP7 414 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 PALM2Q8IXS6 379 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 LINC01465Q8N7H1 131 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 CXorf38Q8TB03 319 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 TRAPPC12Q8WVT3 735 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 HPDLQ96IR7 371 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 HEXIM2Q96MH2 286 aaKnown RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 PDZD7Q9H5P4 517 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 NOD2Q9HC29 1040 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ARHGEF3Q9NR81 526 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 PDGFCQ9NRA1 345 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 COLQQ9Y215 455 aaPredicted RBP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 IQANK1A0A1B0GTG1 560 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ZNF487B1APH4 448 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 CHADO15335 359 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 RBP3P10745 1247 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 CTGFP29279 349 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 MSH2P43246 934 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 GDF10P55107 478 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 CDH8P55286 799 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 SF3A3Q12874 501 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGCL-203ENST00000374490 DPYSL3Q14195 570 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 AMHR2Q16671 573 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 FYB2Q5VWT5 728 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ANKRD22Q5VYY1 191 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ASRGL1Q7L266 308 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ECHDC2Q86YB7 292 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 ANKMY2Q8IV38 441 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 KIAA0319LQ8IZA0 1049 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 FITM2Q8N6M3 262 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 FBXO36Q8NEA4 188 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 TEKT4Q8WW24 435 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 TWNKQ96RR1 684 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 CYTH2Q99418 400 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 MINDY3Q9H8M7 445 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 IFT122Q9HBG6 1241 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 PAK5Q9P286 719 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
HMGCL-203ENST00000374490 KIAA0100Q14667 2235 aaKnown RBP14.54□□□□□ -0.08
HMGCL-203ENST00000374490 MKI67P46013 3256 aaKnown RBP14.54□□□□□ -0.08
HMGCL-203ENST00000374490 PRPSAP2O60256 369 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 UNC5CO95185 931 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 TGM2P21980 687 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 BBS9Q3SYG4 887 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 BOLA3Q53S33 107 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 KCNT1Q5JUK3 1230 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 FNBP1LQ5T0N5 605 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 DARS2Q6PI48 645 aaKnown RBP14.54□□□□□ -0.08
HMGCL-203ENST00000374490 MAMDC4Q6UXC1 1216 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 C3orf62Q6ZUJ4 267 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 FAM47EQ6ZV65 393 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 UNC45BQ8IWX7 931 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 TMEM192Q8IY95 271 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 C4orf33Q8N1A6 199 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 EMC1Q8N766 993 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 SPATA18Q8TC71 538 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.54□□□□□ -0.08
HMGCL-203ENST00000374490 HSPH1Q92598 858 aa14.54□□□□□ -0.08
HMGCL-203ENST00000374490 DPF3Q92784 378 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms