RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 IPO5O00410 1097 aaKnown RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 TRPA1O75762 1119 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 SLITRK3O94933 977 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 FAM13AO94988 1023 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 OCM2P0CE71 109 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 OCMP0CE72 109 aaPredicted RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 CYP11B1P15538 503 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF12P17014 697 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 COPAP53621 1224 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 DCDC5Q6ZRR9 648 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 FBXO33Q7Z6M2 555 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 CCDC33Q8N5R6 958 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 RAB3IL1Q8TBN0 382 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 TMIGD2Q96BF3 282 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 MECRQ9BV79 373 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
PRPF4-201ENST00000374198 GNEQ9Y223 722 aaKnown RBP13.43□□□□□ -0.26
PRPF4-201ENST00000374198 CIITAP33076 1130 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 PSMD6Q15008 389 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 RARS2Q5T160 578 aaKnown RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 C6orf52Q5T4I8 152 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 CES4AQ5XG92 561 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 CRLF3Q8IUI8 442 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 TRIML2Q8N7C3 387 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 TSPAN14Q8NG11 270 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 E2F7Q96AV8 911 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 CSRNP1Q96S65 589 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 EBF4Q9BQW3 602 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 TMEM117Q9H0C3 514 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 ZNF287Q9HBT7 754 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 SLC38A7Q9NVC3 462 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 GPC6Q9Y625 555 aaPredicted RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 ASTN2O75129 1339 aaPredicted RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 XPOTO43592 962 aaKnown RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 PPP1R11O60927 126 aaPredicted RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 OXSR1O95747 527 aaPredicted RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 ALDH3B2P48448 385 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 PPP3CAQ08209 521 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 PTK7Q13308 1070 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 OASLQ15646 514 aaKnown RBP13.42□□□□□ -0.26
PRPF4-201ENST00000374198 RHOT1Q8IXI2 618 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 KATNAL2Q8IYT4 538 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 FBXW8Q8N3Y1 598 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 RANBP9Q96S59 729 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 CYP4F11Q9HBI6 524 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 TRPC7Q9HCX4 862 aa13.42□□□□□ -0.26
PRPF4-201ENST00000374198 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 PNMA6FA0A0J9YX94 578 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CCDC162PA2VCL2 907 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 SPTLC1O15269 473 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 PSTPIP1O43586 416 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 FUCA1P04066 466 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CD58P19256 250 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
PRPF4-201ENST00000374198 DENND5BQ6ZUT9 1274 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 KREMEN1Q96MU8 473 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 NACA2Q9H009 215 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 PSTPIP2Q9H939 334 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 IGSF9Q9P2J2 1179 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 ITGA11Q9UKX5 1188 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 A0A1B0GTW7 788 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 SOBPA7XYQ1 873 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CYP3A7P24462 503 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
PRPF4-201ENST00000374198 GCLMP48507 274 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CDK8P49336 464 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 TAS2R40P59535 323 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 GAD2Q05329 585 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 FAAP100Q0VG06 881 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CCDC153Q494R4 210 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 FNBP1LQ5T0N5 605 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 TICAM1Q8IUC6 712 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 PALM2Q8IXS6 379 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 DEFB107AQ8IZN7 70 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 LRGUKQ96M69 825 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 GPATCH1Q9BRR8 931 aaKnown RBP13.41□□□□□ -0.26
PRPF4-201ENST00000374198 WDR83Q9BRX9 315 aaKnown RBP13.41□□□□□ -0.26
PRPF4-201ENST00000374198 SNED1Q8TER0 1413 aa13.41□□□□□ -0.26
PRPF4-201ENST00000374198 COPEO14579 308 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 PROSCO94903 275 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 KLHL2O95198 593 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 HSPA13P48723 471 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 WASHC5Q12768 1159 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 PDK1Q15118 436 aa13.4□□□□□ -0.26
PRPF4-201ENST00000374198 CHI3L2Q15782 390 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms