RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NCOA4Q13772 614 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 DUPD1Q68J44 220 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 ADAT2Q7Z6V5 191 aaKnown RBP15□□□□□ -0.01
HMGA1-203ENST00000374116 ARFGAP2Q8N6H7 521 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 CXorf38Q8TB03 319 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 AUTS2Q8WXX7 1259 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 RUNDC3BQ96NL0 473 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 ERP44Q9BS26 406 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 NEUROG2Q9H2A3 272 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 AAASQ9NRG9 546 aa15□□□□□ -0.01
HMGA1-203ENST00000374116 TADA2AO75478 443 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 DNAJC8O75937 253 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 NEBLO76041 1014 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TNNC2P02585 160 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CYP1A1P04798 512 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TBXAS1P24557 533 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 GBP1P32455 592 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 MARCKSL1P49006 195 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 ZNF132P52740 706 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CLNS1AP54105 237 aaKnown RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 RWDD2BP57060 319 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 NOP14P78316 857 aaKnown RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 SLMAPQ14BN4 828 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 SURF1Q15526 300 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 SPDYCQ5MJ68 293 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TRIM72Q6ZMU5 477 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CCDC121Q6ZUS5 278 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 MCOLN2Q8IZK6 566 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TMEM169Q96HH4 297 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 PLVAPQ9BX97 442 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 SPG21Q9NZD8 308 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 PCYOX1Q9UHG3 505 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 ADAM28Q9UKQ2 775 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 DERAQ9Y315 318 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 GOLGA6L10A6NI86 522 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 C2CD2LO14523 706 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 MGRN1O60291 552 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 PYGMP11217 842 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 LRPAP1P30533 357 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CA8P35219 290 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 MYL6P60660 151 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 GPM6BQ13491 265 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CYP1B1Q16678 543 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 PPP1R2P3Q6NXS1 205 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 CEP57Q86XR8 500 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 PRELID2Q8N945 189 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 POF1BQ8WVV4 589 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 ATP6V1G3Q96LB4 118 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TMEM175Q9BSA9 504 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TRIM51Q9BSJ1 452 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 DPH5Q9H2P9 285 aa14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TPX2Q9ULW0 747 aaKnown RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 TIMM13Q9Y5L4 95 aaPredicted RBP14.99□□□□□ -0.01
HMGA1-203ENST00000374116 PIRO00625 290 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 XPOTO43592 962 aaKnown RBP14.98□□□□□ -0.01
HMGA1-203ENST00000374116 CALCAP01258 141 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 PAEPP09466 180 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 CYP3A5P20815 502 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 IRS1P35568 1242 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 PTGIRP43119 386 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 LILRA4P59901 499 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 CENPCQ03188 943 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 CAMK1Q14012 370 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 UAP1Q16222 522 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-203ENST00000374116 TIGD5Q53EQ6 642 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 ANKRD20A8PQ5CZ79 823 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 RNF187Q5TA31 235 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-203ENST00000374116 ZNF697Q5TEC3 545 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 AADACL2Q6P093 401 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 DCLRE1AQ6PJP8 1040 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 TMC3Q7Z5M5 1100 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 SLC13A5Q86YT5 568 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-203ENST00000374116 JAMLQ86YT9 394 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 SPPL3Q8TCT6 385 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 MAGOHBQ96A72 148 aaKnown RBP14.98□□□□□ -0.01
HMGA1-203ENST00000374116 BTBD6Q96KE9 485 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 CCDC114Q96M63 670 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 COLEC11Q9BWP8 271 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 RABEP2Q9H5N1 569 aa14.98□□□□□ -0.01
HMGA1-203ENST00000374116 COL4A4P53420 1690 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-203ENST00000374116 PRUNE2Q8WUY3 3088 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 XIRP2A4UGR9 3374 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 C5orf67F2Z3F1 127 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 H3BNC9 293 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 LPXNO60711 386 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 SLC1A1P43005 524 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 NSFP46459 744 aaKnown RBP14.97□□□□□ -0.01
HMGA1-203ENST00000374116 ERVFC1P60507 584 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 TTC19Q6DKK2 380 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-203ENST00000374116 NT5DC4Q86YG4 428 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 VPS52Q8N1B4 723 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 CYFIP2Q96F07 1278 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 VCPIP1Q96JH7 1222 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 FMO2Q99518 471 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 TMBIM4Q9HC24 238 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 ANAPC7Q9UJX3 599 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 NFS1Q9Y697 457 aa14.97□□□□□ -0.01
HMGA1-203ENST00000374116 VWA8A3KMH1 1905 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms