RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 HSMCR30P0CW71 290 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 ILF2Q12905 390 aaKnown RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 XRCC4Q13426 336 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 PAN2Q504Q3 1202 aaKnown RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 TRMT11Q7Z4G4 463 aaKnown RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 CYP4X1Q8N118 509 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 CHL1O00533 1208 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 CYP2A7P20853 494 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 BCAP31P51572 246 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF512BQ96KM6 892 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 RSPH9Q9H1X1 276 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 AAR2Q9Y312 384 aaKnown RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 SNX24Q9Y343 169 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 SASH1O94885 1247 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 OR6B1O95007 311 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 LDOC1O95751 146 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 ADD2P35612 726 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 COASYQ13057 564 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 TRIM16LQ309B1 348 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 FAM20CQ8IXL6 584 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 RERGQ96A58 199 aaPredicted RBP9.39□□□□□ -0.91
CSMD2-205ENST00000373381 FAM167BQ9BTA0 163 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 PCMTD2Q9NV79 361 aa9.39□□□□□ -0.91
CSMD2-205ENST00000373381 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ABCC10Q5T3U5 1492 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SCGNO76038 276 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 GEMP55040 296 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CCDC184Q52MB2 194 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PRR23CQ6ZRP0 262 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 GAS2L1Q99501 681 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ELOVL6Q9H5J4 265 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PSMC3IPQ9P2W1 217 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 COX7A2P14406 83 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 OLFML2BQ68BL8 750 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 BRSK2Q8IWQ3 736 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 HPCAL1P37235 193 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF557Q8N988 423 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 TMEM159Q96B96 161 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 RPRD1AQ96P16 312 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 TRABDQ9H4I3 376 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 IGFALSP35858 605 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SLFNL1Q499Z3 407 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 RAD54LQ92698 747 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 EPB41L4BQ9H329 900 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 INTS10Q9NVR2 710 aaKnown RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 VSTM5A8MXK1 200 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CYP2A6P11509 494 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ITGB6P18564 788 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PPP2R2AP63151 447 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 EXOSC10Q01780 885 aaKnown RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 MEA1Q16626 185 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF280DQ6N043 979 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PROX1Q92786 737 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 VPS35Q96QK1 796 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 M0QYT0 321 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SMCO1Q147U7 214 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 C18orf25Q96B23 403 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ALG6Q9Y672 507 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CCL15-CCL14A0A0B4J2E2 113 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 MCIDASD6RGH6 385 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CYP2C9P11712 490 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PTPN9P43378 593 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CCL15Q16663 113 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 FAM129BQ96TA1 746 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PCDHGA3Q9Y5H0 932 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SMCO3A2RU48 225 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ABRQ12979 859 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 C12orf60Q5U649 245 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 COMMD9Q9P000 198 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 UXTQ9UBK9 157 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF682O95780 498 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 IFNA16P05015 189 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF846Q147U1 533 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SLC13A5Q86YT5 568 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 TRPC4APQ8TEL6 797 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 PAGE5Q96GU1 130 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 OMDQ99983 421 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 INTS2Q9H0H0 1204 aaKnown RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ANKARQ7Z5J8 1434 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ATP5F1P24539 256 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 FAM171BQ6P995 826 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 HAVCR1Q96D42 359 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ITCHQ96J02 903 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 TRIM51Q9BSJ1 452 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 ZNF335Q9H4Z2 1342 aaPredicted RBP9.38□□□□□ -0.91
CSMD2-205ENST00000373381 CCDC88CQ9P219 2028 aa9.38□□□□□ -0.91
CSMD2-205ENST00000373381 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms