RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PNMA8AQ86V59 439 aaPredicted RBP24.88■■□□□ 1.57
CDK9-201ENST00000373264 ALG13Q9NP73 1137 aaKnown RBP24.88■■□□□ 1.57
CDK9-201ENST00000373264 ITGA11Q9UKX5 1188 aa24.88■■□□□ 1.57
CDK9-201ENST00000373264 H7C0C1 242 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 P4HA1P13674 534 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 HOXA11P31270 313 aaPredicted RBP24.87■■□□□ 1.57
CDK9-201ENST00000373264 ATP5OP48047 213 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 ROR1Q01973 937 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 POU5F1BQ06416 359 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 NOMO1Q15155 1222 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 APOL6Q9BWW8 343 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 RSAD1Q9HA92 442 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 PHTF1Q9UMS5 762 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 PRPF4O43172 522 aaKnown RBP eCLIP24.87■■□□□ 1.57
CDK9-201ENST00000373264 PRPSAP2O60256 369 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 ENDOD1O94919 500 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 ADRA1DP25100 572 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 SNAPC2Q13487 334 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 PCGF5Q86SE9 256 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 PALM2Q8IXS6 379 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 PQLC3Q8N755 202 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 ATP11CQ8NB49 1132 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 TRIM56Q9BRZ2 755 aaKnown RBP24.87■■□□□ 1.57
CDK9-201ENST00000373264 NR2E3Q9Y5X4 410 aa24.87■■□□□ 1.57
CDK9-201ENST00000373264 PDHXO00330 501 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 EPHX2P34913 555 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 PCK1P35558 622 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 LVRNQ6Q4G3 990 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 OLFML1Q6UWY5 402 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 FAM172AQ8WUF8 416 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 SLC17A7Q9P2U7 560 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 C2CD2Q9Y426 696 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 E7ESA3 106 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 GSTA1P08263 222 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 BNIP1Q12981 228 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 KRT81Q14533 505 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 PPP6R3Q5H9R7 873 aaPredicted RBP24.86■■□□□ 1.57
CDK9-201ENST00000373264 PLD5Q8N7P1 536 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 MZB1Q8WU39 189 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 DCAKDQ8WVC6 231 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 USP29Q9HBJ7 922 aa24.86■■□□□ 1.57
CDK9-201ENST00000373264 A8MUI8 341 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 IGF2BP3O00425 579 aaKnown RBP eCLIP24.85■■□□□ 1.57
CDK9-201ENST00000373264 PAPSS1O43252 624 aaPredicted RBP24.85■■□□□ 1.57
CDK9-201ENST00000373264 AKAP5P24588 427 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 SPARCL1Q14515 664 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 SNCBQ16143 134 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 ZNF618Q5T7W0 954 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 C7orf31Q8N865 590 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 LENG1Q96BZ8 264 aaPredicted RBP24.85■■□□□ 1.57
CDK9-201ENST00000373264 SLC10A4Q96EP9 437 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 RNF157Q96PX1 679 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 ACSS3Q9H6R3 686 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 SLC24A2Q9UI40 661 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 PLXNB2O15031 1838 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 KBTBD13C9JR72 458 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 KCNN4O15554 427 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 MGRN1O60291 552 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 FAM155BO75949 473 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 RBL1P28749 1068 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 GTF2A1P52655 376 aaPredicted RBP24.85■■□□□ 1.57
CDK9-201ENST00000373264 PDIK1LQ8N165 341 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 NETO2Q8NC67 525 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 SHCBP1Q8NEM2 672 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 PCDH19Q8TAB3 1148 aa24.85■■□□□ 1.57
CDK9-201ENST00000373264 PDGFRBP09619 1106 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 NR1H3Q13133 447 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 PRPF39Q86UA1 669 aaKnown RBP24.84■■□□□ 1.57
CDK9-201ENST00000373264 OSMRQ99650 979 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 SNRNP25Q9BV90 132 aaKnown RBP24.84■■□□□ 1.57
CDK9-201ENST00000373264 NXF3Q9H4D5 531 aaKnown RBP24.84■■□□□ 1.57
CDK9-201ENST00000373264 RAB6BQ9NRW1 208 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 KLK14Q9P0G3 267 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 KLHL14Q9P2G3 628 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 BAIAP2L1Q9UHR4 511 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 BRCA2P51587 3418 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 BTBD19C9JJ37 291 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 CCDC130P13994 396 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 PKDCCQ504Y2 493 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 PRAMEF19Q5SWL8 479 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 ADGRD1Q6QNK2 874 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 CCDC125Q86Z20 511 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.84■■□□□ 1.57
CDK9-201ENST00000373264 DHRS4Q9BTZ2 278 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 VTA1Q9NP79 307 aa24.84■■□□□ 1.57
CDK9-201ENST00000373264 TCRBV9S1A1TA0A576 114 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 MMP3P08254 477 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 RNASELQ05823 741 aaKnown RBP24.83■■□□□ 1.57
CDK9-201ENST00000373264 KCNJ11Q14654 390 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 KBTBD12Q3ZCT8 623 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 TCP10LQ8TDR4 215 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 FAF2Q96CS3 445 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 RXFP1Q9HBX9 757 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 PCDH18Q9HCL0 1135 aa24.83■■□□□ 1.57
CDK9-201ENST00000373264 GRM5P41594 1212 aa24.83■■□□□ 1.56
CDK9-201ENST00000373264 HDAC4P56524 1084 aa24.83■■□□□ 1.56
CDK9-201ENST00000373264 HIC1Q14526 733 aa24.83■■□□□ 1.56
CDK9-201ENST00000373264 E2F5Q15329 346 aa24.83■■□□□ 1.56
CDK9-201ENST00000373264 PDK4Q16654 411 aa24.83■■□□□ 1.56
CDK9-201ENST00000373264 LDLRAD1Q5T700 205 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms