RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CETPP11597 493 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 EIF4BP23588 611 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 PSMA4P25789 261 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 RPA1P27694 616 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 GTF2A2P52657 109 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 EFR3AQ14156 821 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SNX17Q15036 470 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 LLGL1Q15334 1064 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SGSM1Q2NKQ1 1148 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ZBTB33Q86T24 672 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PLEKHG4BQ96PX9 1271 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 MAP3K20Q9NYL2 800 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 QSER1Q2KHR3 1735 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CCDC162PA2VCL2 907 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 GGPS1O95749 300 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CYP2W1Q8TAV3 490 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 APOL6Q9BWW8 343 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PCDHB4Q9Y5E5 795 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 EVPLQ92817 2033 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CALB1P05937 261 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ITGAXP20702 1163 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 MTF1Q14872 753 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 EMC2Q15006 297 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 RHOT2Q8IXI1 618 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 UBE2TQ9NPD8 197 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 BAIAP2Q9UQB8 552 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 RGPD3A6NKT7 1758 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 RGPD4Q7Z3J3 1758 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 OPLAHO14841 1288 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 EPHB2P29323 1055 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PHC1P78364 1004 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CCDC81Q6ZN84 652 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CAVIN3Q969G5 261 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 KRT84Q9NSB2 600 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ZNF232Q9UNY5 417 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 MYRFQ9Y2G1 1151 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CCDC78A2IDD5 438 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 SAC3D1A6NKF1 404 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CYP3A4P08684 503 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 KPNA1P52294 538 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 NR1H2P55055 460 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 NEDD8Q15843 81 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PDCD4Q53EL6 469 aaKnown RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 FAM45BPQ6NSW5 357 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 GPRASP2Q96D09 838 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ZBTB18Q99592 522 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 GLIS2Q9BZE0 524 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 RNF38Q9H0F5 515 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 IRS2Q9Y4H2 1338 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ZNF185O15231 689 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 SRGAP2CP0DJJ0 459 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 BPIFB4P59827 614 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 YWHAHQ04917 246 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 MAPRE2Q15555 327 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PLA2G4FQ68DD2 849 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 TRIM69Q86WT6 500 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ERICH1Q86X53 443 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ERO1BQ86YB8 467 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CCDC60Q8IWA6 550 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 XXYLT1Q8NBI6 393 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 SLC5A5Q92911 643 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 MTERF3Q96E29 417 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PPP1R16BQ96T49 567 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ADPGKQ9BRR6 497 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 TRIM51Q9BSJ1 452 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 REXO4Q9GZR2 422 aaKnown RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 EXOSC4Q9NPD3 245 aaKnown RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 FZD1Q9UP38 647 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 GPC6Q9Y625 555 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 PHIPQ8WWQ0 1821 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 RGS5O15539 181 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PPP1R11O60927 126 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 SRGAP2BP0DMP2 458 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ARP10275 920 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 HSD17B3P37058 310 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 TRAF2Q12933 501 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ZC3H12BQ5HYM0 836 aaKnown RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 SLFN12LQ6IEE8 588 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 KCNV1Q6PIU1 500 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 CYP4V2Q6ZWL3 525 aaPredicted RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 IKBIPQ70UQ0 350 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 NAT14Q8WUY8 206 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 TAMM41Q96BW9 452 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 MTMR9Q96QG7 549 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 EPAS1Q99814 870 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ELOVL6Q9H5J4 265 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 PDXKO00764 312 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 B3GALNT1O75752 331 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 RFX1P22670 979 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 ZNF394Q53GI3 561 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 RBM44Q6ZP01 1051 aaKnown RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 TSPAN14Q8NG11 270 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 MAGEB18Q96M61 343 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 METTL5Q9NRN9 209 aaKnown RBP6.82□□□□□ -1.32
CHD6-203ENST00000373233 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 LRRC53A6NM62 1247 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 FAM86B1E9PN63 330 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 INO80B-WBP1J3KQ70 363 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 WNT7AO00755 349 aa6.82□□□□□ -1.32
CHD6-203ENST00000373233 EIF3DO15371 548 aaKnown RBP eCLIP6.82□□□□□ -1.323e-6■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms