RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 RTN3O95197 1032 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 ADH5P11766 374 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 PTGER3P43115 390 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 TNNC1P63316 161 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 AMPD3Q01432 767 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 GAD2Q05329 585 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 E2F4Q16254 413 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 MAP7D1Q3KQU3 841 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 LY6G5CQ5SRR4 150 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 SNX30Q5VWJ9 437 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 C12orf40Q86WS4 652 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 TMEFF1Q8IYR6 380 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 PHTF2Q8N3S3 785 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 B3GALNT2Q8NCR0 500 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 PDZD8Q8NEN9 1154 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 SPACA7Q96KW9 195 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 NUSAP1Q9BXS6 441 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZNF518BQ9C0D4 1074 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 CUEDC2Q9H467 287 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 DPEP3Q9H4B8 488 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 AGPAT3Q9NRZ7 376 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 TMEM74BQ9NUR3 256 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 IL37Q9NZH6 218 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 MBD1Q9UIS9 605 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZMIZ1Q9ULJ6 1067 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 NUP205Q92621 2012 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZZEF1O43149 2961 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 THADAQ6YHU6 1953 aa13.91□□□□□ -0.18
TRAPPC3-201ENST00000373159 SCAMP3O14828 347 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 COCHO43405 550 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 ATICP31939 592 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 CYP24A1Q07973 514 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 UAP1L1Q3KQV9 507 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 HECTD3Q5T447 861 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 PEAR1Q5VY43 1037 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 SLC23A3Q6PIS1 610 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 ETFBKMTQ8IXQ9 262 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 FRMD1Q8N878 549 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 XXYLT1Q8NBI6 393 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 CCDC127Q96BQ5 260 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZFRQ96KR1 1074 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 XYLT2Q9H1B5 865 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 CHORDC1Q9UHD1 332 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
TRAPPC3-201ENST00000373159 ASPMQ8IZT6 3477 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 MYO18AQ92614 2054 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 FAM92AA1XBS5 289 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 TBC1D3BA6NDS4 549 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 TMEM8BA6NDV4 472 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 UPK3BL1B0FP48 263 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 UPK3BL2E5RIL1 263 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 CLDN5O00501 218 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 HOXC11O43248 304 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 SPINK2P20155 84 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 HOXD12P35452 270 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 TUBP50607 506 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 MYL6P60660 151 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 TRPC3Q13507 836 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 FAM26FQ5R3K3 315 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 TRMT11Q7Z4G4 463 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 DEFB124Q8NES8 71 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 HMGB4Q8WW32 186 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 FBXO32Q969P5 355 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 SYAP1Q96A49 352 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 SCNM1Q9BWG6 230 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 GZF1Q9H116 711 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 SLC32A1Q9H598 525 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 VRTNQ9H8Y1 702 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 COMMD8Q9NX08 183 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 DEC1Q9P2X7 70 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 NXF1Q9UBU9 619 aaKnown RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 PILRBQ9UKJ0 227 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 STARD13Q9Y3M8 1113 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 PKD1L2Q7Z442 2459 aa13.89□□□□□ -0.19
TRAPPC3-201ENST00000373159 TCRBV21S2A2A0A5A6 115 aa13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 CLIC2O15247 247 aa13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 TULP3O75386 442 aa13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 TOP3BO95985 862 aaKnown RBP13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 ENGP17813 658 aa13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 CYP2J2P51589 502 aa13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 ASIC1P78348 528 aa13.88□□□□□ -0.19
TRAPPC3-201ENST00000373159 KDSRQ06136 332 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms