RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CDH18Q13634 790 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 FAM180AQ6UWF9 173 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 SLFN11Q7Z7L1 901 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 CARNMT1Q8N4J0 409 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 GPRC5AQ8NFJ5 357 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 SCUBE2Q9NQ36 999 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 FAM153BP0C7A2 387 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 H2AFXP16104 143 aaPredicted RBP24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 MYL6P60660 151 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 FAM153CQ494X1 144 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 EARS2Q5JPH6 523 aaKnown RBP24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 GNASQ5JWF2 1037 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 C6orf203Q9P0P8 240 aaPredicted RBP24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 FAM153AQ9UHL3 310 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 ADGRB3O60242 1522 aa24.73■■□□□ 1.55
RAPGEF1-203ENST00000372195 WDR93Q6P2C0 686 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 ANXA9O76027 345 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 SERPINB1P30740 379 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 CSHL1Q14406 222 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 LRRC6Q86X45 466 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 CATSPER2Q96P56 530 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 C17orf102A2RUQ5 167 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 SDR42E2A6NKP2 422 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 LZTS3O60299 673 aaPredicted RBP24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 GUCA1CO95843 209 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 STAG3L1P0CL83 205 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 POLLQ9UGP5 575 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 DOLKQ9UPQ8 538 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 NEXMIFQ5QGS0 1516 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 MAFGO15525 162 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 ARHGEF19Q8IW93 802 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 HDAC7Q8WUI4 952 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 ZNF333Q96JL9 665 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 TMEM237Q96Q45 408 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 FAM129AQ9BZQ8 928 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 CYB561D2O14569 222 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 ODC1P11926 461 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 CHI3L1P36222 383 aaPredicted RBP24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 ARL4DP49703 201 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 ISLR2Q6UXK2 745 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 HEATR4Q86WZ0 1026 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 SUGP1Q8IWZ8 645 aaKnown RBP24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 GLMNQ92990 594 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 SEMA4AQ9H3S1 761 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 GPRC5DQ9NZD1 345 aa24.72■■□□□ 1.55
RAPGEF1-203ENST00000372195 MLNP12872 115 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 ATP6V1B2P21281 511 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 KCTD19Q17RG1 926 aaPredicted RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 BOLA3Q53S33 107 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 ACTRT1Q8TDG2 376 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 PRMT6Q96LA8 375 aaPredicted RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 RGS5O15539 181 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 TPH1P17752 444 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 STIP1P31948 543 aaKnown RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 GEMP55040 296 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 LAMC2Q13753 1193 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 CYP51A1Q16850 503 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 PTAR1Q7Z6K3 402 aaPredicted RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 SETD3Q86TU7 594 aaPredicted RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 TNIP2Q8NFZ5 429 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 PARK7Q99497 189 aaKnown RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 ATP6V1G2O95670 118 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 NCALDP61601 193 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 GPR141Q7Z602 305 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 EIF3LQ9Y262 564 aaKnown RBP24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 REREQ9P2R6 1566 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 NFYCQ13952 458 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 ADGRF2Q8IZF7 708 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 ATP6V0D2Q8N8Y2 350 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 CHST13Q8NET6 341 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 RBBP8Q99708 897 aa24.71■■□□□ 1.55
RAPGEF1-203ENST00000372195 PRIM2P49643 509 aa24.7■■□□□ 1.55
RAPGEF1-203ENST00000372195 HPCAP84074 193 aa24.7■■□□□ 1.55
RAPGEF1-203ENST00000372195 MAPRE1Q15691 268 aaKnown RBP24.7■■□□□ 1.55
RAPGEF1-203ENST00000372195 TCHHL1Q5QJ38 904 aaPredicted RBP24.7■■□□□ 1.55
RAPGEF1-203ENST00000372195 GPRASP2Q96D09 838 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 TMEM150BA6NC51 233 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 DPEP1P16444 411 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 R3HDM1Q15032 1099 aaKnown RBP24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 PCNX4Q63HM2 1172 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 SRPK1Q96SB4 655 aaKnown RBP24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 SMAPO00193 183 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 WASHC5Q12768 1159 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 BNC2Q6ZN30 1099 aaPredicted RBP24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 DDX20Q9UHI6 824 aaKnown RBP24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 ACADSP16219 412 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 CYP24A1Q07973 514 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 ZNF177Q13360 481 aaPredicted RBP24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 MPZL3Q6UWV2 235 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 AP4E1Q9UPM8 1137 aa24.7■■□□□ 1.54
RAPGEF1-203ENST00000372195 C2orf81A6NN90 581 aa24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 ITGB6P18564 788 aa24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 GJC2Q5T442 439 aaPredicted RBP24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 KIAA0895Q8NCT3 520 aa24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 ZNF286BP0CG31 522 aa24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 RARGP13631 454 aa24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 IZUMO2Q6UXV1 221 aa24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 CELF6Q96J87 481 aaKnown RBP24.69■■□□□ 1.54
RAPGEF1-203ENST00000372195 C10orf88Q9H8K7 445 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms