RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 USP41Q3LFD5 358 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 CTXN3Q4LDR2 81 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 CLEC20AQ6ZU45 233 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 PHLDB2Q86SQ0 1253 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 XYLT1Q86Y38 959 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 UHMK1Q8TAS1 419 aaKnown RBP19.37■□□□□ 0.69
VEGFA-206ENST00000372077 HSFY1Q96LI6 401 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 CAPS2Q9BXY5 557 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 MIS12Q9H081 205 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 MRPL47Q9HD33 250 aaKnown RBP19.37■□□□□ 0.69
VEGFA-206ENST00000372077 NR2E3Q9Y5X4 410 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 SCINQ9Y6U3 715 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 KIAA1671Q9BY89 1806 aa19.37■□□□□ 0.69
VEGFA-206ENST00000372077 TMEM110-MUSTN1A8MSY1 372 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 H7C4K7 107 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 FAM200BP0CF97 657 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 PSEN1P49768 467 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 NNTQ13423 1086 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 CYP4A22Q5TCH4 519 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 ANKS3Q6ZW76 656 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 DCP1BQ8IZD4 617 aaKnown RBP19.36■□□□□ 0.69
VEGFA-206ENST00000372077 C3orf20Q8ND61 904 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 CLP1Q92989 425 aaKnown RBP19.36■□□□□ 0.69
VEGFA-206ENST00000372077 MCRS1Q96EZ8 462 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 AAASQ9NRG9 546 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 BEST1O76090 585 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 PPP1R15BQ5SWA1 713 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 TMEM169Q96HH4 297 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 SMOQ99835 787 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 TSPYL1Q9H0U9 437 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 CSNK1G1Q9HCP0 422 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 NR2E1Q9Y466 385 aa19.36■□□□□ 0.69
VEGFA-206ENST00000372077 NLRC5Q86WI3 1866 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 BUB1BO60566 1050 aaPredicted RBP19.35■□□□□ 0.69
VEGFA-206ENST00000372077 SOD2P04179 222 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 RGS7P49802 495 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 SMARCD1Q96GM5 515 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 RPGRIP1Q96KN7 1286 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 KRT82Q9NSB4 513 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 AMACRQ9UHK6 382 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 SMIM23A6NLE4 172 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 E5RJQ4 531 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 CLGNO14967 610 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 AP1G2O75843 785 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 MCM3P25205 808 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 SLC8A3P57103 927 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 CFAP58Q5T655 872 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 C4orf50Q6ZRC1 276 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 DDX53Q86TM3 631 aaKnown RBP19.35■□□□□ 0.69
VEGFA-206ENST00000372077 MICALL1Q8N3F8 863 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 ZMIZ2Q8NF64 920 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 PIK3R5Q8WYR1 880 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 KCTD13Q8WZ19 329 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 HERC2P3Q9BVR0 1158 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 NEUROG2Q9H2A3 272 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 SYNCQ9H7C4 482 aa19.35■□□□□ 0.69
VEGFA-206ENST00000372077 OR4Q2P0C623 313 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 PPM1AP35813 382 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 ACADSBP45954 432 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 SNX16P57768 344 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 CEP85LQ5SZL2 805 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 DAAM2Q86T65 1068 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 PIGZQ86VD9 579 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 FEZF2Q8TBJ5 459 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 TMEM30AQ9NV96 361 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 CACNA2D1P54289 1103 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 RPS6KA1Q15418 735 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 NFE2Q16621 373 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-206ENST00000372077 C11orf63Q6NUN7 778 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 DNAJC24Q6P3W2 148 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 RSPO2Q6UXX9 243 aaPredicted RBP19.34■□□□□ 0.69
VEGFA-206ENST00000372077 SYCE1Q8N0S2 351 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 MTRRQ9UBK8 725 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 PCDHB12Q9Y5F1 795 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 BACE2Q9Y5Z0 518 aa19.34■□□□□ 0.69
VEGFA-206ENST00000372077 SIGLEC16A6NMB1 481 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 TLL1O43897 1013 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 PTPRDP23468 1912 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 MAGEA10P43363 369 aaPredicted RBP19.33■□□□□ 0.69
VEGFA-206ENST00000372077 MAP3K7CLP57077 242 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 TUBB4BP68371 445 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 TAP1Q03518 808 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 SLC39A12Q504Y0 691 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 PACS2Q86VP3 889 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 TMEM191CA6NGB0 347 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 BDNFP23560 247 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 DSG1Q02413 1049 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 PRSS55Q6UWB4 352 aaPredicted RBP19.33■□□□□ 0.69
VEGFA-206ENST00000372077 SPATA2LQ8IUW3 424 aaPredicted RBP19.33■□□□□ 0.69
VEGFA-206ENST00000372077 FUBP3Q96I24 572 aaKnown RBP eCLIP19.33■□□□□ 0.692e-6■□□□□ 10.7
VEGFA-206ENST00000372077 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.69
VEGFA-206ENST00000372077 RHOBTB2Q9BYZ6 727 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 VIPAS39Q9H9C1 493 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 GEMIN8Q9NWZ8 242 aaKnown RBP19.33■□□□□ 0.69
VEGFA-206ENST00000372077 ANAPC7Q9UJX3 599 aa19.33■□□□□ 0.69
VEGFA-206ENST00000372077 GJB6O95452 261 aa19.33■□□□□ 0.68
VEGFA-206ENST00000372077 IVLP07476 585 aa19.33■□□□□ 0.68
VEGFA-206ENST00000372077 CDR1P51861 262 aa19.33■□□□□ 0.68
VEGFA-206ENST00000372077 C9orf50Q5SZB4 431 aa19.33■□□□□ 0.68
VEGFA-206ENST00000372077 MEI1Q5TIA1 1274 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms