RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 WDR5P61964 334 aaKnown RBP27.53■■■□□ 2
ATPAF1-202ENST00000371937 ATP11AP98196 1134 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 CDO1Q16878 200 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 TXNRD3NBQ6F5E7 133 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 FAM172AQ8WUF8 416 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 RNF25Q96BH1 459 aaPredicted RBP27.53■■■□□ 2
ATPAF1-202ENST00000371937 ZNF689Q96CS4 500 aaPredicted RBP27.53■■■□□ 2
ATPAF1-202ENST00000371937 FUBP3Q96I24 572 aaKnown RBP eCLIP27.53■■■□□ 2
ATPAF1-202ENST00000371937 SLITRK1Q96PX8 696 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 ULBP1Q9BZM6 244 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 CWH43Q9H720 699 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 IL23AQ9NPF7 189 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 PCSK1NQ9UHG2 260 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 H7C4K7 107 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 PHF2O75151 1096 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 RALAP11233 206 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 IL1R2P27930 398 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 CHRNA3P32297 505 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 PBX3P40426 434 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 MATKP42679 507 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 SH3PXD2AQ5TCZ1 1133 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 PRELID2Q8N945 189 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 NGRNQ9NPE2 291 aaKnown RBP27.53■■■□□ 2
ATPAF1-202ENST00000371937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.53■■■□□ 2
ATPAF1-202ENST00000371937 PRKAG2Q9UGJ0 569 aa27.53■■■□□ 2
ATPAF1-202ENST00000371937 LRRD1A4D1F6 860 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 DAB1O75553 588 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 EN2P19622 333 aaPredicted RBP27.52■■■□□ 2
ATPAF1-202ENST00000371937 PTPN7P35236 360 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 ANKS3Q6ZW76 656 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 HDAC7Q8WUI4 952 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 CENPIQ92674 756 aaPredicted RBP27.52■■■□□ 2
ATPAF1-202ENST00000371937 TTPALQ9BTX7 342 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 KLHL11Q9NVR0 708 aa27.52■■■□□ 2
ATPAF1-202ENST00000371937 DMGDHQ9UI17 866 aaKnown RBP27.52■■■□□ 2
ATPAF1-202ENST00000371937 TCRBV7S2A1N4TA0A589 114 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 CARNS1A5YM72 827 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 RAD51CO43502 376 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 ERLIN1O75477 346 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 ZBED1O96006 694 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 OR4Q2P0C623 313 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 RARAP10276 462 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 DAOAP59103 153 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 VSNL1P62760 191 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 DEFB103AP81534 67 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 SLC7A5Q01650 507 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 CYP1B1Q16678 543 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 BOLA3Q53S33 107 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 SPOCD1Q6ZMY3 1216 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 GPRIN1Q7Z2K8 1008 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 SCML4Q8N228 414 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 RAPGEF5Q92565 580 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 RUNDC3BQ96NL0 473 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 C11orf84Q9BUA3 381 aaPredicted RBP27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 POPDC2Q9HBU9 364 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 PI4K2BG5E9Z4 385 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 ACRP10323 421 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 GRIK1P39086 918 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 SIX1Q15475 284 aaPredicted RBP27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 SMTNL2Q2TAL5 461 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 TFDP3Q5H9I0 405 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 MFSD7Q6UXD7 560 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 TMEM173Q86WV6 379 aaPredicted RBP27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 ZDHHC14Q8IZN3 488 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 IRGQQ8WZA9 623 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 MAGOHBQ96A72 148 aaKnown RBP27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 TBCBQ99426 244 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 HOMER3Q9NSC5 361 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 PCDHB5Q9Y5E4 795 aa27.51■■□□□ 1.99
ATPAF1-202ENST00000371937 VWA8A3KMH1 1905 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 NOS2P35228 1153 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 MRPS25P82663 173 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 KLF1Q13351 362 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 LLGL1Q15334 1064 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 SLC25A52Q3SY17 297 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 KCNT1Q5JUK3 1230 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 SPOUT1Q5T280 376 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 VSTM1Q6UX27 236 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 CMTR2Q8IYT2 770 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 DEFB106AQ8N104 65 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 C12orf50Q8NA57 414 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 CMASQ8NFW8 434 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 NDRG1Q92597 394 aaKnown RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 HEMGNQ9BXL5 484 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 ABI2Q9NYB9 513 aaPredicted RBP27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 AMACRQ9UHK6 382 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 STAP1Q9ULZ2 295 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 EFR3BQ9Y2G0 817 aa27.5■■□□□ 1.99
ATPAF1-202ENST00000371937 NLRC5Q86WI3 1866 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 HEXIM1O94992 359 aaKnown RBP27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 TJP3O95049 919 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 USP17L7P0C7H9 530 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 CYP2F1P24903 491 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 CLCN6P51797 869 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 RABGGTBP53611 331 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 SMARCB1Q12824 385 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 DHX34Q14147 1143 aaKnown RBP27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 STRADAQ7RTN6 431 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 KCTD6Q8NC69 237 aa27.49■■□□□ 1.99
ATPAF1-202ENST00000371937 BCL7CQ8WUZ0 217 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms