RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
NDC1-201ENST00000371429 GCNT1Q02742 428 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 CLEC16AQ2KHT3 1053 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 TEDDM1Q5T9Z0 273 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 UGT3A1Q6NUS8 523 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 PIP4K2CQ8TBX8 421 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 ZNF558Q96NG5 402 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 KLF6Q99612 283 aaPredicted RBP15.26■□□□□ 0.03
NDC1-201ENST00000371429 UXTQ9UBK9 157 aaPredicted RBP15.26■□□□□ 0.03
NDC1-201ENST00000371429 FAM95CA0A1B0GW59 222 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 RTN3O95197 1032 aaPredicted RBP15.26■□□□□ 0.03
NDC1-201ENST00000371429 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
NDC1-201ENST00000371429 CCDC157Q569K6 752 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 KIAA0319LQ8IZA0 1049 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 ATG4AQ8WYN0 398 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 ARL8AQ96BM9 186 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 DEFB118Q96PH6 123 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 ACADMP11310 421 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 MLH1P40692 756 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 PACSIN1Q9BY11 444 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 TMEM134Q9H6X4 195 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 RNF103-CHMP3A0A140T963 221 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 TATDN1Q6P1N9 297 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 ZNF571Q7Z3V5 609 aaPredicted RBP15.26■□□□□ 0.03
NDC1-201ENST00000371429 MTMR9Q96QG7 549 aa15.26■□□□□ 0.03
NDC1-201ENST00000371429 MEFVO15553 781 aaPredicted RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 SCNN1BP51168 640 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 GEMIN4P57678 1058 aaKnown RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 MCL1Q07820 350 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 TMEM259Q4ZIN3 620 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 MROH9Q5TGP6 573 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 CCNI2Q6ZMN8 369 aaPredicted RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 HTATIP2Q9BUP3 242 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 NT5MQ9NPB1 228 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 GRID1Q9ULK0 1009 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 ZNF541Q9H0D2 1346 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 CHUKO15111 745 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 SRP72O76094 671 aaKnown RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 ACBD5Q5T8D3 534 aaPredicted RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 TMEM86AQ8N2M4 240 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 SLC35C1Q96A29 364 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 OTUB1Q96FW1 271 aaPredicted RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 SERPINB11Q96P15 392 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 MRPL17Q9NRX2 175 aaKnown RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 ALDH1A2O94788 518 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 ITGALP20701 1170 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 PMS1P54277 932 aaKnown RBP15.25■□□□□ 0.03
NDC1-201ENST00000371429 SLC12A3P55017 1021 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 FAM83EQ2M2I3 478 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 KCNMB3Q9NPA1 279 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 RNF19AQ9NV58 838 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 PSD3Q9NYI0 1048 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 ANKRD63C9JTQ0 380 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 GLRA2P23416 452 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 NFIL3Q16649 462 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 SGO1Q5FBB7 561 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 CDKAL1Q5VV42 579 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 BTNL9Q6UXG8 535 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 PLPPR4Q7Z2D5 763 aa15.25■□□□□ 0.03
NDC1-201ENST00000371429 RAMP2O60895 175 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 DDHD2O94830 711 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 BDNFP23560 247 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 HIST2H2ACQ16777 129 aaPredicted RBP15.24■□□□□ 0.03
NDC1-201ENST00000371429 HIST2H2AA3Q6FI13 130 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 PALB2Q86YC2 1186 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 ZDHHC17Q8IUH5 632 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 ELMO3Q96BJ8 720 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 FTHL17Q9BXU8 183 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 ADGRE3Q9BY15 652 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 PDGFCQ9NRA1 345 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 RICTORQ6R327 1708 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 H0Y3Z8 333 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 TSPAN3O60637 253 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 SOAT2O75908 522 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 MZF1P28698 734 aaPredicted RBP15.24■□□□□ 0.03
NDC1-201ENST00000371429 ZNF268Q14587 947 aaPredicted RBP15.24■□□□□ 0.03
NDC1-201ENST00000371429 TTC39BQ5VTQ0 682 aaPredicted RBP15.24■□□□□ 0.03
NDC1-201ENST00000371429 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 IL31RAQ8NI17 732 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 APOL2Q9BQE5 337 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 THEGQ9P2T0 379 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 MARCOQ9UEW3 520 aaPredicted RBP15.24■□□□□ 0.03
NDC1-201ENST00000371429 C5orf58C9J3I9 102 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 PAEPP09466 180 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 MTA1Q13330 715 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 MARC1Q5VT66 337 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 SPOCD1Q6ZMY3 1216 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 TFAP2DQ7Z6R9 452 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 NLRP14Q86W24 1093 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 CCNJLQ8IV13 435 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 XPO6Q96QU8 1125 aaKnown RBP15.24■□□□□ 0.03
NDC1-201ENST00000371429 OSGEPQ9NPF4 335 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 RBM22Q9NW64 420 aaKnown RBP eCLIP15.24■□□□□ 0.031e-7■■■■■ 31.6
NDC1-201ENST00000371429 TCP11X1B4DZS4 312 aa15.24■□□□□ 0.03
NDC1-201ENST00000371429 NCAM2O15394 837 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms