RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 BSNDQ8WZ55 320 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 TRIM56Q9BRZ2 755 aaKnown RBP10.05□□□□□ -0.8
LRRC40-201ENST00000370952 APOBEC3GQ9HC16 384 aaKnown RBP10.05□□□□□ -0.8
LRRC40-201ENST00000370952 UBAP1Q9NZ09 502 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 INPP5FQ9Y2H2 1132 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 PLLPQ9Y342 182 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 SDR42E2A6NKP2 422 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
LRRC40-201ENST00000370952 TOM1L1O75674 476 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 IL1BP01584 269 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 SERPINA6P08185 405 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 CDK4P11802 303 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 ACO1P21399 889 aaKnown RBP10.05□□□□□ -0.8
LRRC40-201ENST00000370952 SH2D4BQ5SQS7 431 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 CYP4A22Q5TCH4 519 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 PRR5LQ6MZQ0 368 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 IYDQ6PHW0 289 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 C1orf228Q6PIY5 440 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 PHF13Q86YI8 300 aaPredicted RBP10.05□□□□□ -0.8
LRRC40-201ENST00000370952 ICA1LQ8NDH6 482 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 ZFP28Q8NHY6 868 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 IL31RAQ8NI17 732 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 TMC2Q8TDI7 906 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 GMCL1Q96IK5 515 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 KCNH7Q9NS40 1196 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 EXOC7Q9UPT5 735 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 LZTS1Q9Y250 596 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 DTNAQ9Y4J8 743 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 PTPRJQ12913 1337 aa10.05□□□□□ -0.8
LRRC40-201ENST00000370952 HNRNPCP07910 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 VIL1P09327 827 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 PIM1P11309 404 aaPredicted RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 GTF2H1P32780 548 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 QARSP47897 775 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ADARP55265 1226 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 SH3BGRP55822 239 aaPredicted RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MYLK3Q32MK0 819 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ZNF394Q53GI3 561 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 C1orf21Q9H246 121 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 CDH22Q9UJ99 828 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 POMPQ9Y244 141 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ITM2AO43736 263 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 FDFT1P37268 417 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MAGEA8P43361 318 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 RPL5P46777 297 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 STAT2P52630 851 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 C1QBPQ07021 282 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 DBN1Q16643 649 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 AOC3Q16853 763 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 TMEM259Q4ZIN3 620 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 FAXCQ5TGI0 409 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 TDRD10Q5VZ19 366 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 POLNQ7Z5Q5 900 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 DEFB107AQ8IZN7 70 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 GPD1LQ8N335 351 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 GMCL1P1Q8NEA9 526 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 PIP4K2CQ8TBX8 421 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MIPOL1Q8TD10 442 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 PRPF31Q8WWY3 499 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 TEKT1Q969V4 418 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 CNBD2Q96M20 576 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MXRA8Q9BRK3 442 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 SIRPGQ9P1W8 387 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 BLOC1S6Q9UL45 172 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 HEMK1Q9Y5R4 338 aaPredicted RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 CCNT2O60583 730 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 CCDC166P0CW27 439 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ACOT2P49753 483 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 STX3Q13277 289 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 CUL2Q13617 745 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ITGA9Q13797 1035 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 DPYSL3Q14195 570 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MAP3K21Q5TCX8 1036 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MROH9Q5TGP6 573 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 C16orf46Q6P387 395 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 KLC3Q6P597 504 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 SLC26A11Q86WA9 606 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MAP7D3Q8IWC1 876 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ZNF778Q96MU6 729 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 PRPF18Q99633 342 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 XAB2Q9HCS7 855 aaKnown RBP10.04□□□□□ -0.8
LRRC40-201ENST00000370952 SMYD2Q9NRG4 433 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 NDUFA13Q9P0J0 144 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 DNAJC16Q9Y2G8 782 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 MAD1L1Q9Y6D9 718 aa10.04□□□□□ -0.8
LRRC40-201ENST00000370952 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
LRRC40-201ENST00000370952 ADCY3O60266 1144 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 RFPL1O75677 317 aa10.03□□□□□ -0.8
LRRC40-201ENST00000370952 VNN1O95497 513 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms